STRINGSTRING
TCM_011884 TCM_011884 TCM_016705 TCM_016705 TCM_012240 TCM_012240 TCM_030903 TCM_030903 TCM_007024 TCM_007024 TCM_005373 TCM_005373 TCM_005268 TCM_005268 TCM_019522 TCM_019522 TCM_029104 TCM_029104
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_011884Decapping 5. (673 aa)
TCM_016705Decapping 5-like, putative isoform 1. (574 aa)
TCM_012240Binding-like protein isoform 1. (723 aa)
TCM_030903SM-ATX domain-containing protein. (624 aa)
TCM_007024RNA-binding protein 47A. (436 aa)
TCM_005373RNAhelicase-like 8 isoform 1; Belongs to the DEAD box helicase family. (501 aa)
TCM_005268NAD(P)-binding Rossmann-fold superfamily protein. (647 aa)
TCM_019522Decapping 5, putative isoform 2. (601 aa)
TCM_029104CTC-interacting domain 3, putative isoform 2. (643 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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