STRINGSTRING
TCM_012239 TCM_012239 TCM_026723 TCM_026723 TCM_020670 TCM_020670 TCM_018504 TCM_018504 TCM_010821 TCM_010821 TCM_006013 TCM_006013 TCM_004215 TCM_004215 TCM_033915 TCM_033915
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_012239Nucleic acid-binding, OB-fold-like protein, putative. (222 aa)
TCM_026723Mitochondrially targeted single-stranded DNA binding protein isoform 2. (216 aa)
TCM_020670ATP-dependent RNA and DNA helicase, putative isoform 4. (571 aa)
TCM_018504ATP-dependent RNA helicase SUPV3L1 isoform 2. (889 aa)
TCM_010821Mitochondrially targeted single-stranded DNA binding protein. (214 aa)
TCM_006013Plastid transcriptionally active 9, putative. (344 aa)
TCM_004215Primosome PriB/single-strand DNA-binding, putative isoform 1. (289 aa)
TCM_033915Primosome PriB/single-strand DNA-binding, putative. (295 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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