STRINGSTRING
TCM_040771 TCM_040771 TCM_025463 TCM_025463 TCM_001299 TCM_001299 TCM_002348 TCM_002348 TCM_006895 TCM_006895 TCM_024636 TCM_024636 TCM_022844 TCM_022844 TCM_026258 TCM_026258 TCM_043261 TCM_043261 TCM_043331 TCM_043331 TCM_012055 TCM_012055 TCM_041300 TCM_041300 TCM_027415 TCM_027415 TCM_027418 TCM_027418 TCM_027417 TCM_027417 TCM_037083 TCM_037083
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_0407713'-5'-exoribonuclease family protein, putative isoform 1. (420 aa)
TCM_0254633'-5'-exoribonuclease family protein isoform 1. (453 aa)
TCM_001299Ribosomal RNA processing 4. (319 aa)
TCM_002348Uncharacterized protein. (108 aa)
TCM_006895Polynucleotidyl transferase, putative. (205 aa)
TCM_0246363'-5'-exoribonuclease family protein. (302 aa)
TCM_022844Polynucleotidyl transferase. (285 aa)
TCM_026258F-box associated ubiquitination effector family protein, putative. (410 aa)
TCM_0432613'-5'-exoribonuclease family protein isoform 7. (288 aa)
TCM_043331Polynucleotidyl transferase, putative. (252 aa)
TCM_012055PNAS-3 related isoform 1. (240 aa)
TCM_041300Polynucleotidyl transferase, ribonuclease H-like superfamily protein. (280 aa)
TCM_027415Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1. (274 aa)
TCM_027418Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1. (274 aa)
TCM_027417CCR4-associated factor 1. (356 aa)
TCM_037083Polynucleotidyl transferase, ribonuclease H-like superfamily protein. (274 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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