STRINGSTRING
TCM_026622 TCM_026622 TCM_033511 TCM_033511 TCM_026518 TCM_026518 TCM_032420 TCM_032420 TCM_030588 TCM_030588 TCM_030528 TCM_030528 TCM_030590 TCM_030590 TCM_026797 TCM_026797 TCM_025856 TCM_025856 TCM_025075 TCM_025075 TCM_025065 TCM_025065 TCM_022887 TCM_022887 TCM_020132 TCM_020132 TCM_020112 TCM_020112 TCM_021231 TCM_021231 TCM_021070 TCM_021070 TCM_046785 TCM_046785 TCM_020578 TCM_020578 TCM_019639 TCM_019639 TCM_011852 TCM_011852 TCM_019682 TCM_019682 TCM_019767 TCM_019767 TCM_019516 TCM_019516 TCM_019515 TCM_019515 TCM_018570 TCM_018570 TCM_018717 TCM_018717 TCM_018488 TCM_018488 TCM_017718 TCM_017718 TCM_017045 TCM_017045 TCM_011621 TCM_011621 TCM_011796 TCM_011796 TCM_011282 TCM_011282 TCM_011026 TCM_011026 TCM_006319 TCM_006319 TCM_006292 TCM_006292 TCM_007636 TCM_007636 TCM_007803 TCM_007803 TCM_005153 TCM_005153 TCM_014015 TCM_014015 TCM_013517 TCM_013517 TCM_012160 TCM_012160 TCM_012217 TCM_012217 TCM_045585 TCM_045585 TCM_045202 TCM_045202 TCM_045196 TCM_045196 TCM_045572 TCM_045572 TCM_045033 TCM_045033 TCM_044172 TCM_044172 TCM_045209 TCM_045209 TCM_043101 TCM_043101 TCM_042707 TCM_042707 TCM_033969 TCM_033969 TCM_035807 TCM_035807 TCM_035213 TCM_035213 TCM_035071 TCM_035071 TCM_034772 TCM_034772 TCM_046881 TCM_046881 TCM_033970 TCM_033970 TCM_030759 TCM_030759 TCM_006150 TCM_006150 TCM_034099 TCM_034099 TCM_033966 TCM_033966 TCM_006068 TCM_006068 TCM_003952 TCM_003952 TCM_003999 TCM_003999 TCM_003433 TCM_003433 TCM_003699 TCM_003699 TCM_003122 TCM_003122 TCM_002723 TCM_002723 TCM_002298 TCM_002298 TCM_005040 TCM_005040 TCM_002245 TCM_002245 TCM_001878 TCM_001878 TCM_001258 TCM_001258 TCM_000849 TCM_000849 TCM_001045 TCM_001045 TCM_001497 TCM_001497 TCM_004387 TCM_004387 TCM_041571 TCM_041571 TCM_041386 TCM_041386 TCM_041093 TCM_041093 TCM_041474 TCM_041474 TCM_041092 TCM_041092 TCM_040901 TCM_040901 TCM_039785 TCM_039785 TCM_038431 TCM_038431 TCM_040406 TCM_040406 TCM_001227 TCM_001227 TCM_000405 TCM_000405 TCM_000406 TCM_000406 TCM_000070 TCM_000070 TCM_006921 TCM_006921 TCM_030422 TCM_030422 TCM_030374 TCM_030374 TCM_037986 TCM_037986 TCM_037456 TCM_037456 TCM_037924 TCM_037924 TCM_037544 TCM_037544 TCM_037062 TCM_037062 TCM_030428 TCM_030428 TCM_030408 TCM_030408 TCM_030444 TCM_030444 TCM_030307 TCM_030307 TCM_029274 TCM_029274 TCM_029352 TCM_029352 TCM_029275 TCM_029275 TCM_029278 TCM_029278 TCM_029264 TCM_029264 TCM_029236 TCM_029236 TCM_029312 TCM_029312 TCM_029263 TCM_029263 TCM_016144 TCM_016144 TCM_016115 TCM_016115 TCM_028841 TCM_028841 TCM_045800 TCM_045800 TCM_042314 TCM_042314 TCM_040313 TCM_040313 TCM_041752 TCM_041752 TCM_027481 TCM_027481 TCM_016558 TCM_016558 TCM_027256 TCM_027256 TCM_016659 TCM_016659 TCM_016565 TCM_016565 TCM_015505 TCM_015505 TCM_015395 TCM_015395 TCM_015007 TCM_015007 TCM_015205 TCM_015205 TCM_014628 TCM_014628 TCM_014667 TCM_014667 TCM_014665 TCM_014665 TCM_014797 TCM_014797 TCM_014403 TCM_014403 TCM_013934 TCM_013934 TCM_044169 TCM_044169 TCM_014118 TCM_014118 TCM_012580 TCM_012580 TCM_033514 TCM_033514 TCM_026659 TCM_026659
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_026622Sucrose nonfermenting 4. (479 aa)
TCM_033511Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (259 aa)
TCM_026518Uncharacterized protein. (310 aa)
TCM_032420RBR-type E3 ubiquitin transferase. (313 aa)
TCM_030588Coiled-coil domain-containing protein 22, putative isoform 1. (518 aa)
TCM_030528Proteasome activating protein 200 isoform 1. (1684 aa)
TCM_030590Uncharacterized protein. (93 aa)
TCM_026797Chloroplast RNA binding. (379 aa)
TCM_025856Polynucleotidyl transferase, putative isoform 1. (920 aa)
TCM_025075RBR-type E3 ubiquitin transferase. (596 aa)
TCM_025065Transducin family protein / WD-40 repeat family protein isoform 1. (445 aa)
TCM_022887Gag-pol polyprotein-like protein. (304 aa)
TCM_020132Eukaryotic translation initiation factor 3 subunit H; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (337 aa)
TCM_020112RBR-type E3 ubiquitin transferase. (574 aa)
TCM_021231Eukaryotic translation initiation factor 2 gamma subunit, GAMMA isoform 2. (489 aa)
TCM_021070Mo25 family protein isoform 1. (344 aa)
TCM_046785Sucrose nonfermenting 4. (489 aa)
TCM_020578Cyclin family protein isoform 1; Belongs to the cyclin family. (536 aa)
TCM_019639RING/U-box superfamily protein. (462 aa)
TCM_011852Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein isoform 1. (158 aa)
TCM_019682Serine/threonine protein kinase 2; Belongs to the protein kinase superfamily. (488 aa)
TCM_019767HEAT repeat,WD domain isoform 1. (1392 aa)
TCM_019516Uncharacterized protein. (215 aa)
TCM_019515Retrotrans_gag domain-containing protein. (108 aa)
TCM_018570Defective in cullin neddylation protein; Neddylation of cullins play an essential role in the regulation of SCF-type complexes activity. (321 aa)
TCM_018717TPX2 protein family, putative. (507 aa)
TCM_018488Ribosomal protein S4; Belongs to the universal ribosomal protein uS4 family. (197 aa)
TCM_017718TPX2 family protein. (280 aa)
TCM_017045Pentatricopeptide repeat (PPR-like) superfamily protein, putative. (741 aa)
TCM_011621Eukaryotic translation initiation factor 5A. (159 aa)
TCM_011796Zinc knuckle family protein. (417 aa)
TCM_011282Transcriptional adapter. (593 aa)
TCM_011026Mms zwei. (276 aa)
TCM_006319RBR-type E3 ubiquitin transferase. (592 aa)
TCM_006292Uncharacterized protein. (70 aa)
TCM_007636Light-mediated development protein DET1, putative isoform 1. (549 aa)
TCM_007803SET domain protein 2 isoform 1. (2483 aa)
TCM_005153SET domain protein 14, putative isoform 1; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1029 aa)
TCM_014015Cyclophilin71. (84 aa)
TCM_013517Serine/threonine-protein kinase AtPK2/AtPK19 isoform 1; Belongs to the protein kinase superfamily. (439 aa)
TCM_012160Uncharacterized protein. (75 aa)
TCM_0122172-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein, putative isoform 1. (549 aa)
TCM_045585RING/U-box superfamily protein isoform 2. (433 aa)
TCM_045202ATPase_AAA_core domain-containing protein. (93 aa)
TCM_045196Regulatory particle triple-A 1A; Belongs to the AAA ATPase family. (136 aa)
TCM_045572Non-specific serine/threonine protein kinase; Belongs to the protein kinase superfamily. (485 aa)
TCM_045033Kinases,ubiquitin-protein ligases isoform 1. (1652 aa)
TCM_044172Regulatory particle triple-A ATPase 3 isoform 1; Belongs to the AAA ATPase family. (401 aa)
TCM_045209Regulatory particle triple-A 1A, putative. (293 aa)
TCM_043101Duplicated homeodomain-like superfamily protein isoform 2. (1384 aa)
TCM_042707FIZZY-related 3 isoform 1. (485 aa)
TCM_033969Uncharacterized protein isoform 1. (488 aa)
TCM_035807Nucleic acid-binding proteins superfamily isoform 2. (521 aa)
TCM_035213Histone-lysine N-methyltransferase ASHH2. (2265 aa)
TCM_035071Eukaryotic translation initiation factor 2 subunit 3, putative. (190 aa)
TCM_034772Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (86 aa)
TCM_046881AAA-type ATPase family protein; Belongs to the AAA ATPase family. (398 aa)
TCM_033970RBR-type E3 ubiquitin transferase. (535 aa)
TCM_030759Enhanced downy mildew 2, putative. (1232 aa)
TCM_006150Smg-4/UPF3 family protein, putative isoform 1. (514 aa)
TCM_034099Cyclin family protein, putative isoform 1; Belongs to the cyclin family. (539 aa)
TCM_033966RBR-type E3 ubiquitin transferase. (590 aa)
TCM_006068Breast cancer susceptibility1, putative isoform 1. (1002 aa)
TCM_003952Brca1 associated ring domain, putative isoform 1. (684 aa)
TCM_003999Uncharacterized protein. (66 aa)
TCM_003433Translation factor GUF1 homolog, chloroplastic; Promotes chloroplast protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. (704 aa)
TCM_003699Uncharacterized protein. (258 aa)
TCM_003122Regulatory particle AAA-ATPase 2A; Belongs to the AAA ATPase family. (446 aa)
TCM_002723Carboxyl terminus of HSC70-interacting protein. (274 aa)
TCM_002298Mo25 family protein. (366 aa)
TCM_00504060S acidic ribosomal protein family; Belongs to the eukaryotic ribosomal protein P1/P2 family. (185 aa)
TCM_002245Enhanced downy mildew 2, putative isoform 1. (981 aa)
TCM_001878AT-hook DNA-binding family protein. (257 aa)
TCM_001258RNA polymerase II, Rpb4, core protein isoform 1. (138 aa)
TCM_000849Uncharacterized protein. (85 aa)
TCM_001045Cak assembly factor, putative. (191 aa)
TCM_001497Regulatory particle AAA-ATPase 2A isoform 1; Belongs to the AAA ATPase family. (446 aa)
TCM_004387Chloroplast stem-loop binding protein of 41 kDa isoform 1. (400 aa)
TCM_041571Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (88 aa)
TCM_041386Uncharacterized protein. (290 aa)
TCM_041093RBR-type E3 ubiquitin transferase. (601 aa)
TCM_041474Peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform 1. (687 aa)
TCM_041092RBR-type E3 ubiquitin transferase. (545 aa)
TCM_040901General control non-repressible 4. (724 aa)
TCM_039785Regulatory particle non-ATPase 13. (363 aa)
TCM_038431Autophagy-related protein 11. (1159 aa)
TCM_040406Alpha/beta-Hydrolases superfamily protein. (223 aa)
TCM_001227KPC1. (1274 aa)
TCM_000405Chromatin remodeling 1 isoform 1. (754 aa)
TCM_000406Sulfite exporter TauE/SafE family protein, putative isoform 1. (476 aa)
TCM_000070Rab escort protein. (944 aa)
TCM_006921S3 self-incompatibility locus-linked pollen 3.15 protein isoform 2. (677 aa)
TCM_030422Pentatricopeptide (PPR) repeat-containing protein. (700 aa)
TCM_030374Mo25 family protein. (504 aa)
TCM_037986Regulatory particle triple-A ATPase 6A; Belongs to the AAA ATPase family. (417 aa)
TCM_037456RBR-type E3 ubiquitin transferase. (374 aa)
TCM_037924Fibronectin type III domain-containing protein isoform 1. (720 aa)
TCM_037544Mob1/phocein family protein. (261 aa)
TCM_037062Eukaryotic translation initiation factor 5A. (160 aa)
TCM_030428Pentatricopeptide (PPR) repeat-containing-like protein. (418 aa)
TCM_030408Transcriptional adapter. (550 aa)
TCM_030444Histone acetyltransferase complex component-like protein. (334 aa)
TCM_030307P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the AAA ATPase family. (600 aa)
TCM_029274RBR-type E3 ubiquitin transferase. (301 aa)
TCM_029352RBR-type E3 ubiquitin transferase. (520 aa)
TCM_029275RBR-type E3 ubiquitin transferase. (292 aa)
TCM_029278RBR-type E3 ubiquitin transferase. (183 aa)
TCM_029264Regulatory particle triple-A 1A isoform 1; Belongs to the AAA ATPase family. (426 aa)
TCM_029236RBR-type E3 ubiquitin transferase. (301 aa)
TCM_029312Cyclin family protein, putative isoform 1; Belongs to the cyclin family. (597 aa)
TCM_029263Regulatory particle triple-A 1A; Belongs to the AAA ATPase family. (426 aa)
TCM_016144FIZZY-related 2 isoform 1. (484 aa)
TCM_016115Cell cycle regulated microtubule associated protein, putative isoform 1. (524 aa)
TCM_028841Smg-4/UPF3 family protein, putative isoform 1. (523 aa)
TCM_045800Translation factor GUF1 homolog, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (1068 aa)
TCM_042314RING/U-box superfamily protein, putative. (409 aa)
TCM_040313Uncharacterized protein. (80 aa)
TCM_041752DNA-directed RNA polymerase II isoform 1. (176 aa)
TCM_027481F-box/RNI-like superfamily protein. (489 aa)
TCM_016558RBR-type E3 ubiquitin transferase. (678 aa)
TCM_027256Transducin family protein / WD-40 repeat family protein. (437 aa)
TCM_016659Mob1/phocein family protein isoform 1. (215 aa)
TCM_016565Uncharacterized protein. (106 aa)
TCM_01550560S acidic ribosomal protein family, putative; Belongs to the eukaryotic ribosomal protein P1/P2 family. (114 aa)
TCM_015395SET domain protein 16 isoform 1; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. TRX/MLL subfamily. (1090 aa)
TCM_015007Cell cycle regulated microtubule associated protein, putative. (460 aa)
TCM_015205Transducin family protein / WD-40 repeat family protein. (455 aa)
TCM_014628SAP domain-containing protein isoform 2. (180 aa)
TCM_014667Skp2-like, FIST C domain, FIST domain, N-terminal isoform 1. (522 aa)
TCM_014665F-box family protein, putative isoform 1. (574 aa)
TCM_014797Transducin/WD40 repeat-like superfamily protein. (1029 aa)
TCM_014403Transducin family protein / WD-40 repeat family protein isoform 1. (988 aa)
TCM_013934Ribosomal protein S4; Belongs to the universal ribosomal protein uS4 family. (197 aa)
TCM_044169Regulatory particle triple-A ATPase 3 isoform 1; Belongs to the AAA ATPase family. (419 aa)
TCM_014118Eukaryotic translation initiation factor 5A-1 isoform 2. (184 aa)
TCM_012580Transducin/WD40 repeat-like superfamily protein. (327 aa)
TCM_033514Phototropic-responsive NPH3 family protein, putative; Belongs to the NPH3 family. (592 aa)
TCM_026659Regulatory particle triple-A ATPase 5A; Belongs to the AAA ATPase family. (423 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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