STRINGSTRING
TCM_035065 TCM_035065 TCM_000044 TCM_000044 TCM_000043 TCM_000043 TCM_000758 TCM_000758 TCM_001023 TCM_001023 TCM_001299 TCM_001299 TCM_001329 TCM_001329 TCM_002348 TCM_002348 TCM_002192 TCM_002192 TCM_002577 TCM_002577 TCM_002265 TCM_002265 TCM_002662 TCM_002662 TCM_002455 TCM_002455 TCM_001025 TCM_001025 TCM_004832 TCM_004832 TCM_005006 TCM_005006 TCM_005103 TCM_005103 TCM_002131 TCM_002131 TCM_004925 TCM_004925 TCM_006944 TCM_006944 TCM_005016 TCM_005016 TCM_007504 TCM_007504 TCM_007077 TCM_007077 TCM_010030 TCM_010030 TCM_009671 TCM_009671 TCM_006895 TCM_006895 TCM_010663 TCM_010663 TCM_011364 TCM_011364 TCM_011386 TCM_011386 TCM_011446 TCM_011446 TCM_011631 TCM_011631 TCM_011700 TCM_011700 TCM_011699 TCM_011699 TCM_016930 TCM_016930 TCM_010210 TCM_010210 TCM_017010 TCM_017010 TCM_010664 TCM_010664 TCM_018409 TCM_018409 TCM_016820 TCM_016820 TCM_017033 TCM_017033 TCM_021339 TCM_021339 TCM_020284 TCM_020284 TCM_021924 TCM_021924 TCM_020717 TCM_020717 TCM_022448 TCM_022448 TCM_024698 TCM_024698 TCM_024636 TCM_024636 TCM_024703 TCM_024703 TCM_025106 TCM_025106 TCM_025138 TCM_025138 TCM_025503 TCM_025503 TCM_025463 TCM_025463 TCM_025856 TCM_025856 TCM_026324 TCM_026324 TCM_025836 TCM_025836 TCM_022844 TCM_022844 TCM_026340 TCM_026340 TCM_026648 TCM_026648 TCM_026410 TCM_026410 TCM_030630 TCM_030630 TCM_024996 TCM_024996 TCM_030825 TCM_030825 TCM_030826 TCM_030826 TCM_026258 TCM_026258 TCM_033469 TCM_033469 TCM_033542 TCM_033542 TCM_030647 TCM_030647 TCM_031111 TCM_031111 TCM_034372 TCM_034372 TCM_034423 TCM_034423 TCM_034205 TCM_034205 TCM_031646 TCM_031646 TCM_034910 TCM_034910 TCM_043261 TCM_043261 TCM_044402 TCM_044402 TCM_044005 TCM_044005 TCM_043331 TCM_043331 TCM_044307 TCM_044307 TCM_044782 TCM_044782 TCM_045270 TCM_045270 TCM_045291 TCM_045291 TCM_045292 TCM_045292 TCM_036589 TCM_036589 TCM_045364 TCM_045364 TCM_045272 TCM_045272 TCM_045296 TCM_045296 TCM_012025 TCM_012025 TCM_012331 TCM_012331 TCM_013468 TCM_013468 TCM_012278 TCM_012278 TCM_012652 TCM_012652 TCM_045269 TCM_045269 TCM_045357 TCM_045357 TCM_014908 TCM_014908 TCM_015271 TCM_015271 TCM_014814 TCM_014814 TCM_012055 TCM_012055 TCM_015190 TCM_015190 TCM_015537 TCM_015537 TCM_015830 TCM_015830 TCM_015751 TCM_015751 TCM_015822 TCM_015822 TCM_016068 TCM_016068 TCM_014448 TCM_014448 TCM_016231 TCM_016231 TCM_027389 TCM_027389 TCM_027415 TCM_027415 TCM_015191 TCM_015191 TCM_015270 TCM_015270 TCM_027418 TCM_027418 TCM_028839 TCM_028839 TCM_015882 TCM_015882 TCM_029029 TCM_029029 TCM_016182 TCM_016182 TCM_029341 TCM_029341 TCM_029253 TCM_029253 TCM_029352 TCM_029352 TCM_029333 TCM_029333 TCM_029345 TCM_029345 TCM_046750 TCM_046750 TCM_030180 TCM_030180 TCM_027204 TCM_027204 TCM_029962 TCM_029962 TCM_027417 TCM_027417 TCM_029963 TCM_029963 TCM_036757 TCM_036757 TCM_037053 TCM_037053 TCM_036886 TCM_036886 TCM_037410 TCM_037410 TCM_037188 TCM_037188 TCM_029338 TCM_029338 TCM_037856 TCM_037856 TCM_037973 TCM_037973 TCM_038057 TCM_038057 TCM_038358 TCM_038358 TCM_037083 TCM_037083 TCM_037118 TCM_037118 TCM_040771 TCM_040771 TCM_041228 TCM_041228 TCM_041092 TCM_041092 TCM_041099 TCM_041099 TCM_041093 TCM_041093 TCM_041352 TCM_041352 TCM_041300 TCM_041300 TCM_041460 TCM_041460 TCM_042027 TCM_042027 TCM_042039 TCM_042039 TCM_041547 TCM_041547 TCM_046327 TCM_046327
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_035065DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (1099 aa)
TCM_000044Endoribonuclease/protein kinase IRE1-like, putative. (924 aa)
TCM_000043Ribonuclease II family protein isoform 1; Belongs to the RNR ribonuclease family. (938 aa)
TCM_000758Ribonuclease III family protein. (540 aa)
TCM_001023Argonaute protein group, putative; Belongs to the argonaute family. (978 aa)
TCM_001299Ribosomal RNA processing 4. (319 aa)
TCM_001329Endonuclease or glycosyl hydrolase, putative isoform 1. (1073 aa)
TCM_002348Uncharacterized protein. (108 aa)
TCM_002192Eukaryotic translation initiation factor 2c, putative isoform 2; Belongs to the argonaute family. (904 aa)
TCM_002577S-like RNase, putative; Belongs to the RNase T2 family. (300 aa)
TCM_002265Metallo-hydrolase/oxidoreductase superfamily protein. (353 aa)
TCM_002662Poly(A)-specific ribonuclease PARN-like, putative isoform 2. (623 aa)
TCM_002455RNAse E/G-like. (1015 aa)
TCM_001025Argonaute protein group, putative; Belongs to the argonaute family. (970 aa)
TCM_004832Ribonucleases P/MRP protein subunit POP1, putative. (860 aa)
TCM_005006Calcium-binding endonuclease/exonuclease/phosphatase family. (535 aa)
TCM_005103DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (112 aa)
TCM_002131Ribonuclease 3-like protein 3, putative. (301 aa)
TCM_004925Endonuclease or glycosyl hydrolase with C2H2-type zinc finger domain, putative isoform 1. (664 aa)
TCM_006944Cleavage and polyadenylation specificity factor 73-I. (694 aa)
TCM_005016Dicer-like 1 isoform 1; Belongs to the helicase family. Dicer subfamily. (2007 aa)
TCM_007504Polymerase/histidinol phosphatase-like. (496 aa)
TCM_007077Endonuclease or glycosyl hydrolase. (528 aa)
TCM_010030Tetratricopeptide repeat (TPR)-like superfamily protein isoform 2. (470 aa)
TCM_009671Endonuclease 2, 2 isoform 1. (287 aa)
TCM_006895Polynucleotidyl transferase, putative. (205 aa)
TCM_010663RNA-binding family protein isoform 1. (653 aa)
TCM_0113643'-5' exonuclease, putative. (959 aa)
TCM_011386Ribonuclease 2, putative; Belongs to the RNase T2 family. (248 aa)
TCM_011446Translin family protein isoform 2. (301 aa)
TCM_011631Argonaute family protein; Belongs to the argonaute family. (1014 aa)
TCM_011700Ribonuclease 1; Belongs to the RNase T2 family. (227 aa)
TCM_011699Ribonuclease 3; Belongs to the RNase T2 family. (228 aa)
TCM_016930Polyribonucleotide nucleotidyltransferase, putative isoform 1. (980 aa)
TCM_010210RNase H family protein, putative isoform 1. (420 aa)
TCM_017010RNA-binding family protein isoform 1. (305 aa)
TCM_010664RNA-binding family protein isoform 4. (697 aa)
TCM_018409Calcium-binding endonuclease/exonuclease/phosphatase family, putative. (188 aa)
TCM_016820Polynucleotidyl transferase, ribonuclease H-like superfamily protein, putative isoform 4. (305 aa)
TCM_017033Multidrug resistance pump, putative isoform 1. (574 aa)
TCM_021339DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
TCM_020284Ribonuclease P family protein / Rpp14 family protein isoform 1. (154 aa)
TCM_021924Ribonuclease II, putative isoform 1. (795 aa)
TCM_020717Stabilizer of iron transporter SufD / Polynucleotidyl transferase isoform 1; Belongs to the argonaute family. (994 aa)
TCM_022448ENTH/VHS family protein, putative isoform 1. (1125 aa)
TCM_024698PCF11P-similar protein 4. (384 aa)
TCM_0246363'-5'-exoribonuclease family protein. (302 aa)
TCM_024703PCF11P-similar protein 4. (392 aa)
TCM_025106Dicer-like protein isoform 1; Belongs to the helicase family. Dicer subfamily. (1418 aa)
TCM_025138KRR1 family protein, putative isoform 1. (685 aa)
TCM_025503Transducin family protein / WD-40 repeat family protein. (887 aa)
TCM_0254633'-5'-exoribonuclease family protein isoform 1. (453 aa)
TCM_025856Polynucleotidyl transferase, putative isoform 1. (920 aa)
TCM_026324Pathogenesis-related protein P2. (142 aa)
TCM_025836Polyribonucleotide nucleotidyltransferase isoform 1. (946 aa)
TCM_022844Polynucleotidyl transferase. (285 aa)
TCM_026340Pathogenesis-related protein PR-4B. (207 aa)
TCM_02664840S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (80 aa)
TCM_0264105'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (990 aa)
TCM_030630Poly(A)-specific ribonuclease PARN isoform 1. (726 aa)
TCM_024996DNAse I-like superfamily protein isoform 1. (602 aa)
TCM_030825RNAse THREE-like protein 2 isoform 1. (371 aa)
TCM_030826Ribonuclease 3-like protein 2. (379 aa)
TCM_026258F-box associated ubiquitination effector family protein, putative. (410 aa)
TCM_03346940S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (82 aa)
TCM_0335425'-3' exoribonuclease 3. (364 aa)
TCM_030647RNA-binding family protein isoform 1. (709 aa)
TCM_031111tRNAse Z1 isoform 1. (300 aa)
TCM_034372Pre-rRNA-processing protein TSR1 isoform 1. (798 aa)
TCM_034423Endoribonuclease/protein kinase IRE1-like, putative isoform 1. (886 aa)
TCM_0342055'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. Acts as an endogenous post-transcriptional gene silencing (PTGS) suppressor. (1110 aa)
TCM_031646Polynucleotidyl transferase, ribonuclease H-like superfamily protein, putative. (332 aa)
TCM_034910Carbon catabolite repressor protein 4, putative isoform 1. (584 aa)
TCM_0432613'-5'-exoribonuclease family protein isoform 7. (288 aa)
TCM_044402Pre-mRNA cleavage complex II protein family isoform 1. (378 aa)
TCM_044005Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family. (298 aa)
TCM_043331Polynucleotidyl transferase, putative. (252 aa)
TCM_044307P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 2. (1219 aa)
TCM_044782Exonuclease domain-containing protein. (414 aa)
TCM_045270Ribonuclease 2; Belongs to the RNase T2 family. (91 aa)
TCM_045291Ribonuclease 2, putative; Belongs to the RNase T2 family. (252 aa)
TCM_045292Ribonuclease 2, putative; Belongs to the RNase T2 family. (242 aa)
TCM_036589Cleavage stimulation factor 64 kDa subunit, putative. (521 aa)
TCM_045364Uncharacterized protein; Belongs to the RNase T2 family. (142 aa)
TCM_045272Ribonuclease 2, putative; Belongs to the RNase T2 family. (242 aa)
TCM_045296Ribonuclease 2, putative; Belongs to the RNase T2 family. (240 aa)
TCM_012025Ribonuclease III family protein, putative. (189 aa)
TCM_012331DNAse I-like superfamily protein, putative isoform 1. (473 aa)
TCM_013468Stabilizer of iron transporter SufD / Polynucleotidyl transferase isoform 1; Belongs to the argonaute family. (1063 aa)
TCM_012278DNAse I-like superfamily protein, putative isoform 1. (479 aa)
TCM_0126525'-3' exoribonuclease 3. (189 aa)
TCM_045269Ribonuclease 2, putative; Belongs to the RNase T2 family. (241 aa)
TCM_045357Ribonuclease 2, putative; Belongs to the RNase T2 family. (260 aa)
TCM_014908P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (541 aa)
TCM_015271Ribonuclease 2, putative; Belongs to the RNase T2 family. (241 aa)
TCM_014814U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (345 aa)
TCM_012055PNAS-3 related isoform 1. (240 aa)
TCM_015190Cleavage and polyadenylation specificity factor subunit 2. (252 aa)
TCM_015537Calcium-binding endonuclease/exonuclease/phosphatase family. (445 aa)
TCM_015830Uncharacterized protein. (223 aa)
TCM_015751Pentatricopeptide (PPR) repeat-containing protein. (711 aa)
TCM_015822Glycine-rich protein isoform 1. (518 aa)
TCM_016068Zinc finger family protein. (382 aa)
TCM_014448Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (186 aa)
TCM_016231RNA-binding protein nob1, putative isoform 2. (612 aa)
TCM_027389RNAse THREE protein 1, putative isoform 1. (223 aa)
TCM_027415Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1. (274 aa)
TCM_015191Cleavage and polyadenylation specificity factor subunit 2. (742 aa)
TCM_015270Ribonuclease 2, putative; Belongs to the RNase T2 family. (235 aa)
TCM_027418Polynucleotidyl transferase, ribonuclease H-like superfamily protein isoform 1. (274 aa)
TCM_028839tRNAse Z4 isoform 1. (967 aa)
TCM_015882Dynamin-like 120 kDa protein, putative isoform 1. (314 aa)
TCM_029029RNA binding protein, putative. (267 aa)
TCM_016182Uncharacterized protein. (277 aa)
TCM_029341Argonaute protein group; Belongs to the argonaute family. (904 aa)
TCM_029253Pumilio 23, putative isoform 1. (723 aa)
TCM_029352RBR-type E3 ubiquitin transferase. (520 aa)
TCM_029333Argonaute protein group. (794 aa)
TCM_029345Argonaute protein group, putative isoform 1; Belongs to the argonaute family. (1016 aa)
TCM_046750DNAse I-like superfamily protein. (406 aa)
TCM_030180PCF11P-similar protein 4, putative isoform 1. (1004 aa)
TCM_027204Pathogenesis-related protein PR-4B. (199 aa)
TCM_029962Bifunctional nuclease i. (304 aa)
TCM_027417CCR4-associated factor 1. (356 aa)
TCM_029963Endonuclease 4 isoform 1. (304 aa)
TCM_036757Endonuclease V family protein, putative isoform 1. (269 aa)
TCM_037053DNAse I-like superfamily protein isoform 1. (326 aa)
TCM_036886Debranching enzyme 1 isoform 1. (414 aa)
TCM_037410Ribonuclease III, putative isoform 1; Belongs to the helicase family. Dicer subfamily. (1639 aa)
TCM_037188Ribosomal protein S5 domain 2-like superfamily protein isoform 1. (240 aa)
TCM_029338Argonaute family protein, putative. (425 aa)
TCM_037856Aceous RNase P 1, putative isoform 1. (872 aa)
TCM_037973Stabilizer of iron transporter SufD / Polynucleotidyl transferase isoform 1; Belongs to the argonaute family. (943 aa)
TCM_038057Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family. (335 aa)
TCM_038358DNAse I-like superfamily protein, putative isoform 1. (975 aa)
TCM_037083Polynucleotidyl transferase, ribonuclease H-like superfamily protein. (274 aa)
TCM_037118Dicer-like protein, putative isoform 1; Belongs to the helicase family. Dicer subfamily. (1690 aa)
TCM_0407713'-5'-exoribonuclease family protein, putative isoform 1. (420 aa)
TCM_041228RNA cyclase family protein; Belongs to the disease resistance NB-LRR family. (517 aa)
TCM_041092RBR-type E3 ubiquitin transferase. (545 aa)
TCM_041099Splicing endonuclease 2, putative. (240 aa)
TCM_041093RBR-type E3 ubiquitin transferase. (601 aa)
TCM_041352Uncharacterized protein; Belongs to the RNase T2 family. (348 aa)
TCM_041300Polynucleotidyl transferase, ribonuclease H-like superfamily protein. (280 aa)
TCM_041460Aceous RNase P 3 isoform 1. (616 aa)
TCM_042027Argonaute family protein isoform 1. (913 aa)
TCM_042039Polynucleotidyl transferase, ribonuclease H-like superfamily protein, putative isoform 1. (251 aa)
TCM_041547Argonaute protein group; Belongs to the argonaute family. (988 aa)
TCM_046327Ribonuclease 2, putative; Belongs to the RNase T2 family. (237 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.