STRINGSTRING
TCM_007959 TCM_007959 TCM_046274 TCM_046274 TCM_042310 TCM_042310 TCM_041959 TCM_041959 TCM_041647 TCM_041647 TCM_041912 TCM_041912 TCM_041374 TCM_041374 TCM_037939 TCM_037939 TCM_041157 TCM_041157 TCM_040914 TCM_040914 TCM_037892 TCM_037892 TCM_037938 TCM_037938 TCM_036929 TCM_036929 TCM_030080 TCM_030080 TCM_030486 TCM_030486 TCM_029911 TCM_029911 TCM_029621 TCM_029621 TCM_029104 TCM_029104 TCM_029098 TCM_029098 TCM_028736 TCM_028736 TCM_016115 TCM_016115 TCM_029221 TCM_029221 TCM_027603 TCM_027603 TCM_027403 TCM_027403 TCM_027964 TCM_027964 TCM_028352 TCM_028352 TCM_016705 TCM_016705 TCM_014518 TCM_014518 TCM_014229 TCM_014229 TCM_016291 TCM_016291 TCM_015007 TCM_015007 TCM_014903 TCM_014903 TCM_014455 TCM_014455 TCM_014902 TCM_014902 TCM_014380 TCM_014380 TCM_014171 TCM_014171 TCM_013936 TCM_013936 TCM_044357 TCM_044357 TCM_012595 TCM_012595 EIF6-2 EIF6-2 TCM_012240 TCM_012240 TCM_042688 TCM_042688 TCM_045581 TCM_045581 TCM_044506 TCM_044506 LSM3 LSM3 TCM_035364 TCM_035364 TCM_042948 TCM_042948 TCM_042569 TCM_042569 TCM_042405 TCM_042405 TCM_042404 TCM_042404 TCM_035812 TCM_035812 TCM_032439 TCM_032439 TCM_031893 TCM_031893 EIF6 EIF6 TCM_000341 TCM_000341 TCM_000693 TCM_000693 TCM_001431 TCM_001431 TCM_002132 TCM_002132 TCM_002165 TCM_002165 TCM_002009 TCM_002009 TCM_002681 TCM_002681 TCM_002572 TCM_002572 TCM_004654 TCM_004654 TCM_004669 TCM_004669 TCM_001542 TCM_001542 LSM4 LSM4 TCM_005268 TCM_005268 TCM_005373 TCM_005373 TCM_005844 TCM_005844 TCM_005998 TCM_005998 TCM_006056 TCM_006056 TCM_004186 TCM_004186 TCM_006421 TCM_006421 TCM_007210 TCM_007210 TCM_007024 TCM_007024 TCM_011179 TCM_011179 TCM_011884 TCM_011884 TCM_016791 TCM_016791 TCM_011573 TCM_011573 TCM_017074 TCM_017074 TCM_017010 TCM_017010 TCM_017718 TCM_017718 TCM_017373 TCM_017373 TCM_018717 TCM_018717 TCM_018988 TCM_018988 TCM_019633 TCM_019633 TCM_019153 TCM_019153 TCM_019840 TCM_019840 TCM_020788 TCM_020788 TCM_021193 TCM_021193 TCM_019522 TCM_019522 TCM_021680 TCM_021680 TCM_022003 TCM_022003 TCM_021681 TCM_021681 TCM_022658 TCM_022658 TCM_022447 TCM_022447 TCM_022635 TCM_022635 TCM_024859 TCM_024859 TCM_024946 TCM_024946 TCM_025036 TCM_025036 TCM_024923 TCM_024923 TCM_025247 TCM_025247 TCM_025720 TCM_025720 TCM_023088 TCM_023088 TCM_026623 TCM_026623 TCM_026699 TCM_026699 TCM_024858 TCM_024858 TCM_030873 TCM_030873 TCM_025120 TCM_025120 TCM_031121 TCM_031121 TCM_030903 TCM_030903 TCM_025237 TCM_025237 TCM_031378 TCM_031378 TCM_032442 TCM_032442 TCM_032997 TCM_032997 TCM_033500 TCM_033500 TCM_034725 TCM_034725
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_007959Family of Uncharacterized protein function, putative. (593 aa)
TCM_04627440S ribosomal protein S15. (205 aa)
TCM_042310Ribosomal protein L16p/L10e family protein. (220 aa)
TCM_041959P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1052 aa)
TCM_04164760S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (321 aa)
TCM_041912Ribosomal protein L23AB isoform 1; Belongs to the universal ribosomal protein uL23 family. (151 aa)
TCM_041374Ribosomal protein S11 family protein; Belongs to the universal ribosomal protein uS11 family. (150 aa)
TCM_037939Uncharacterized protein. (319 aa)
TCM_041157Spc97 / Spc98 family of spindle pole body component, putative isoform 1. (1238 aa)
TCM_040914Smg-7, putative isoform 1. (989 aa)
TCM_037892Gb:AAD25142.1-like protein. (144 aa)
TCM_037938Uncharacterized protein. (433 aa)
TCM_036929Mitochondrial glycoprotein family protein, putative. (234 aa)
TCM_030080Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (803 aa)
TCM_030486Family of Uncharacterized protein function, putative isoform 1. (511 aa)
TCM_029911WAPL protein, putative isoform 3. (928 aa)
TCM_029621Adipose-regulatory protein, putative. (510 aa)
TCM_029104CTC-interacting domain 3, putative isoform 2. (643 aa)
TCM_029098Midasin; Nuclear chaperone required for maturation and nuclear export of pre-60S ribosome subunits; Belongs to the midasin family. (5406 aa)
TCM_028736Uncharacterized protein. (204 aa)
TCM_016115Cell cycle regulated microtubule associated protein, putative isoform 1. (524 aa)
TCM_02922140S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (313 aa)
TCM_02760350S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. (125 aa)
TCM_027403Mitochondrial glycoprotein family protein, putative. (230 aa)
TCM_027964GTP-binding protein enga, putative. (620 aa)
TCM_028352JHL25H03.15 protein isoform 1. (887 aa)
TCM_016705Decapping 5-like, putative isoform 1. (574 aa)
TCM_014518Centromere protein X isoform 3. (132 aa)
TCM_014229Mitochondrial glycoprotein family protein, putative. (230 aa)
TCM_016291Uncharacterized protein isoform 2. (230 aa)
TCM_015007Cell cycle regulated microtubule associated protein, putative. (460 aa)
TCM_014903C2H2 zinc finger protein, putative. (312 aa)
TCM_014455Minichromosome instability 12-like, putative. (244 aa)
TCM_014902Family of Uncharacterized protein function, putative. (374 aa)
TCM_01438040S ribosomal protein S15. (262 aa)
TCM_014171Ribosomal protein S19e family protein isoform 1. (143 aa)
TCM_013936Microtubule end binding protein EB1A. (268 aa)
TCM_044357SAP30_Sin3_bdg domain-containing protein. (101 aa)
TCM_012595AtGCP3 interacting protein 1. (73 aa)
EIF6-2Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
TCM_012240Binding-like protein isoform 1. (723 aa)
TCM_042688Mitochondrial glycoprotein family protein, putative isoform 1. (258 aa)
TCM_045581Ribosomal protein L16p/L10e family protein isoform 1. (220 aa)
TCM_044506Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. (1020 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (97 aa)
TCM_035364Sequence-specific DNA binding transcription factors. (368 aa)
TCM_042948Ribosomal protein L23AB isoform 1; Belongs to the universal ribosomal protein uL23 family. (154 aa)
TCM_04256960S acidic ribosomal protein P0; Ribosomal protein P0 is the functional equivalent of E.coli protein L10. (321 aa)
TCM_042405ARM repeat superfamily protein. (190 aa)
TCM_042404P60-like, putative. (365 aa)
TCM_035812DEAD-box ATP-dependent RNA helicase 39 isoform 1. (617 aa)
TCM_032439Topoisomerase II-associated protein PAT1, putative. (841 aa)
TCM_031893Uncharacterized protein. (205 aa)
EIF6Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis. (245 aa)
TCM_000341GTP-binding protein Era isoform 1. (420 aa)
TCM_000693End binding protein 1C isoform 1. (327 aa)
TCM_001431Ribosomal protein S5/Elongation factor G/III/V family protein. (1027 aa)
TCM_00213240S ribosomal protein S27. (86 aa)
TCM_002165Uncharacterized protein isoform 1. (301 aa)
TCM_002009Topoisomerase II-associated protein PAT1, putative isoform 1. (798 aa)
TCM_002681Gb:AAB97010.1 isoform 1. (617 aa)
TCM_002572Ribosomal protein L5 B isoform 1. (353 aa)
TCM_004654PETER PAN-like protein isoform 1. (354 aa)
TCM_004669Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. (752 aa)
TCM_001542Coiled-coil domain-containing protein, putative. (301 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (149 aa)
TCM_005268NAD(P)-binding Rossmann-fold superfamily protein. (647 aa)
TCM_005373RNAhelicase-like 8 isoform 1; Belongs to the DEAD box helicase family. (501 aa)
TCM_005844WD-40 repeat family protein / notchless protein, putative isoform 2. (477 aa)
TCM_005998GTP-binding family protein isoform 2; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. Era GTPase family. (418 aa)
TCM_00605630S ribosomal protein S19; Belongs to the universal ribosomal protein uS19 family. (160 aa)
TCM_00418640S ribosomal protein S15-like; Belongs to the universal ribosomal protein uS19 family. (152 aa)
TCM_006421Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (229 aa)
TCM_007210Family of Uncharacterized protein function (DUF566), putative isoform 1. (684 aa)
TCM_007024RNA-binding protein 47A. (436 aa)
TCM_011179Uncharacterized protein. (79 aa)
TCM_011884Decapping 5. (673 aa)
TCM_016791Uncharacterized protein. (219 aa)
TCM_011573Ribosomal protein S19e family protein, putative. (136 aa)
TCM_017074HAUS augmin-like complex subunit 6. (726 aa)
TCM_017010RNA-binding family protein isoform 1. (305 aa)
TCM_017718TPX2 family protein. (280 aa)
TCM_01737340S ribosomal protein S27. (86 aa)
TCM_018717TPX2 protein family, putative. (507 aa)
TCM_018988Uncharacterized protein isoform 1. (803 aa)
TCM_019633Uncharacterized protein isoform 1. (238 aa)
TCM_019153Uncharacterized protein. (64 aa)
TCM_019840Ribosomal protein L5 B isoform 2. (299 aa)
TCM_02078840S ribosomal protein S15-like isoform 1; Belongs to the universal ribosomal protein uS19 family. (152 aa)
TCM_02119360S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (193 aa)
TCM_019522Decapping 5, putative isoform 2. (601 aa)
TCM_021680SAP30_Sin3_bdg domain-containing protein. (82 aa)
TCM_022003ATP binding microtubule motor family protein isoform 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1053 aa)
TCM_021681SAP30_Sin3_bdg domain-containing protein. (339 aa)
TCM_022658Ribosomal protein S11 family protein isoform 1; Belongs to the universal ribosomal protein uS11 family. (150 aa)
TCM_022447Ribosomal RNA processing Brix domain protein. (314 aa)
TCM_022635125 kDa kinesin-related protein isoform 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1009 aa)
TCM_02485960S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (356 aa)
TCM_024946Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. (852 aa)
TCM_025036Nucleic acid-binding, OB-fold-like protein. (65 aa)
TCM_02492360S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (227 aa)
TCM_025247Adipose-regulatory protein, putative. (416 aa)
TCM_025720Nuclear matrix protein 1. (331 aa)
TCM_023088Ribosomal protein L22p/L17e family protein; Belongs to the universal ribosomal protein uL22 family. (275 aa)
TCM_02662340S ribosomal protein S27. (86 aa)
TCM_026699Ribosomal L18p/L5e family protein, putative. (262 aa)
TCM_02485860S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (233 aa)
TCM_030873HAUS augmin-like complex subunit 4 isoform 1. (420 aa)
TCM_025120Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family. (711 aa)
TCM_031121Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (802 aa)
TCM_030903SM-ATX domain-containing protein. (624 aa)
TCM_025237Uncharacterized protein. (72 aa)
TCM_031378Ribosome biogenesis protein brix, putative. (319 aa)
TCM_032442Uncharacterized protein. (512 aa)
TCM_032997Uncharacterized protein. (109 aa)
TCM_033500Ribosomal protein S19e family protein isoform 1. (143 aa)
TCM_034725Family of Uncharacterized protein function, putative isoform 1. (615 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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