7 items (Theobroma cacao) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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protein homology

Your Input:
	TCM_000127	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1861 aa)
	TCM_001258	RNA polymerase II, Rpb4, core protein isoform 1. (138 aa)
	TCM_005864	DNA-directed RNA polymerase II subunit RPB11. (169 aa)
	TCM_021339	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
	TCM_045327	RNA polymerase II fifth largest subunit, putative isoform 1. (263 aa)
	TCM_029879	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1189 aa)
	TCM_041752	DNA-directed RNA polymerase II isoform 1. (176 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_000127	TCM_001258	A0A061DGE8	A0A061DJ22	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase II, Rpb4, core protein isoform 1.	0.935
TCM_000127	TCM_005864	A0A061DGE8	A0A061DVG3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II subunit RPB11.	0.910
TCM_000127	TCM_021339	A0A061DGE8	A0A061EPY6	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.891
TCM_000127	TCM_029879	A0A061DGE8	A0A061GFS1	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.906
TCM_000127	TCM_041752	A0A061DGE8	A0A061GWQ3	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase II isoform 1.	0.867
TCM_000127	TCM_045327	A0A061DGE8	A0A061FSM7	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase II fifth largest subunit, putative isoform 1.	0.582
TCM_001258	TCM_000127	A0A061DJ22	A0A061DGE8	RNA polymerase II, Rpb4, core protein isoform 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.935
TCM_001258	TCM_005864	A0A061DJ22	A0A061DVG3	RNA polymerase II, Rpb4, core protein isoform 1.	DNA-directed RNA polymerase II subunit RPB11.	0.999
TCM_001258	TCM_021339	A0A061DJ22	A0A061EPY6	RNA polymerase II, Rpb4, core protein isoform 1.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
TCM_001258	TCM_029879	A0A061DJ22	A0A061GFS1	RNA polymerase II, Rpb4, core protein isoform 1.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.979
TCM_001258	TCM_041752	A0A061DJ22	A0A061GWQ3	RNA polymerase II, Rpb4, core protein isoform 1.	DNA-directed RNA polymerase II isoform 1.	0.966
TCM_001258	TCM_045327	A0A061DJ22	A0A061FSM7	RNA polymerase II, Rpb4, core protein isoform 1.	RNA polymerase II fifth largest subunit, putative isoform 1.	0.953
TCM_005864	TCM_000127	A0A061DVG3	A0A061DGE8	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.910
TCM_005864	TCM_001258	A0A061DVG3	A0A061DJ22	DNA-directed RNA polymerase II subunit RPB11.	RNA polymerase II, Rpb4, core protein isoform 1.	0.999
TCM_005864	TCM_021339	A0A061DVG3	A0A061EPY6	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
TCM_005864	TCM_029879	A0A061DVG3	A0A061GFS1	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.974
TCM_005864	TCM_041752	A0A061DVG3	A0A061GWQ3	DNA-directed RNA polymerase II subunit RPB11.	DNA-directed RNA polymerase II isoform 1.	0.973
TCM_005864	TCM_045327	A0A061DVG3	A0A061FSM7	DNA-directed RNA polymerase II subunit RPB11.	RNA polymerase II fifth largest subunit, putative isoform 1.	0.952
TCM_021339	TCM_000127	A0A061EPY6	A0A061DGE8	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.891
TCM_021339	TCM_001258	A0A061EPY6	A0A061DJ22	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	RNA polymerase II, Rpb4, core protein isoform 1.	0.999