89 items (Theobroma cacao) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_032736	Uncharacterized protein. (293 aa)
	TCM_022557	Integrase_H2C2 domain-containing protein. (276 aa)
	TCM_021998	Integrase catalytic domain-containing protein. (982 aa)
	TCM_018068	Integrase catalytic domain-containing protein. (113 aa)
	TCM_018216	Integrase catalytic domain-containing protein. (333 aa)
	TCM_017511	Retrotransposon protein, putative. (1263 aa)
	TCM_018243	DNA/RNA polymerases superfamily protein. (1447 aa)
	TCM_018051	Reverse transcriptase domain-containing protein. (481 aa)
	TCM_017700	Retrotransposon protein, putative. (1480 aa)
	TCM_017503	CCHC-type integrase. (246 aa)
	TCM_017282	Retrotrans_gag domain-containing protein. (959 aa)
	TCM_008898	Retrotransposon, Ty3-gypsy subclass-like protein. (183 aa)
	TCM_008503	CCHC-type integrase-like protein. (524 aa)
	TCM_009549	DNA/RNA polymerases superfamily protein. (1515 aa)
	TCM_008970	Uncharacterized protein. (148 aa)
	TCM_008913	Uncharacterized protein. (86 aa)
	TCM_009998	DNA/RNA polymerases superfamily protein. (1537 aa)
	TCM_009605	Uncharacterized protein. (302 aa)
	TCM_009505	Retrotransposon protein. (381 aa)
	TCM_009337	Integrase catalytic domain-containing protein. (67 aa)
	TCM_008507	Integrase catalytic domain-containing protein. (143 aa)
	TCM_008409	Uncharacterized protein. (157 aa)
	TCM_003698	DNA/RNA polymerases superfamily protein. (1336 aa)
	TCM_003298	DNA/RNA polymerases superfamily protein. (1119 aa)
	TCM_003876	Integrase_H2C2 domain-containing protein. (179 aa)
	TCM_003220	Gag protease polyprotein. (269 aa)
	TCM_002485	DNA/RNA polymerases superfamily protein. (920 aa)
	TCM_003365	DNA/RNA polymerases superfamily protein. (1401 aa)
	TCM_003206	Integrase catalytic domain-containing protein. (694 aa)
	TCM_003025	DNA/RNA polymerases superfamily protein. (811 aa)
	TCM_002711	Uncharacterized protein. (249 aa)
	TCM_032795	Retrotransposon protein, unclassified, expressed, putative. (241 aa)
	TCM_033222	Retrotransposon protein, putative. (831 aa)
	TCM_032674	RT_RNaseH_2 domain-containing protein. (81 aa)
	TCM_023017	Uncharacterized protein. (243 aa)
	TCM_032543	Integrase catalytic domain-containing protein. (189 aa)
	TCM_033423	Uncharacterized protein. (809 aa)
	TCM_033499	Retrotransposon protein, Ty3-gypsy sub-class, putative. (284 aa)
	TCM_033345	DNA/RNA polymerases superfamily protein. (1502 aa)
	TCM_036100	Integrase catalytic domain-containing protein. (160 aa)
	TCM_036130	CCHC-type integrase. (174 aa)
	TCM_035611	Uncharacterized protein. (167 aa)
	TCM_036055	Uncharacterized protein. (275 aa)
	TCM_035762	Reverse transcriptase domain-containing protein. (148 aa)
	TCM_043731	Uncharacterized protein. (201 aa)
	TCM_044346	Reverse transcriptase domain-containing protein. (142 aa)
	TCM_043763	DNA/RNA polymerases superfamily protein. (906 aa)
	TCM_043787	Integrase catalytic domain-containing protein. (649 aa)
	TCM_043494	Uncharacterized protein. (238 aa)
	TCM_044877	DNA/RNA polymerases superfamily protein, putative. (1347 aa)
	TCM_044240	Uncharacterized protein. (721 aa)
	TCM_044982	Retrotransposon protein. (170 aa)
	TCM_013205	CCHC-type integrase, putative. (508 aa)
	TCM_012637	Integrase catalytic domain-containing protein. (634 aa)
	TCM_031343	Late embryogenesis abundant protein-related. (399 aa)
	TCM_023320	Reverse transcriptase domain-containing protein. (56 aa)
	TCM_022913	DNA/RNA polymerases superfamily protein. (1400 aa)
	TCM_023737	Integrase catalytic domain-containing protein. (513 aa)
	TCM_023686	DNA/RNA polymerases superfamily protein. (666 aa)
	TCM_023542	DNA/RNA polymerases superfamily protein. (1110 aa)
	TCM_046344	Reverse transcriptase domain-containing protein. (740 aa)
	TCM_045948	Uncharacterized protein. (1225 aa)
	TCM_045859	Retrotransposon protein, Ty3-gypsy subclass, putative. (460 aa)
	TCM_045650	DNA/RNA polymerases superfamily protein. (562 aa)
	TCM_041047	Late embryogenesis abundant (LEA) protein-related. (342 aa)
	TCM_041045	Late embryogenesis abundant protein-related. (379 aa)
	TCM_039810	Integrase catalytic domain-containing protein. (205 aa)
	TCM_040115	Integrase catalytic domain-containing protein. (363 aa)
	TCM_039121	DNA/RNA polymerases superfamily protein. (668 aa)
	TCM_038545	Reverse transcriptase domain-containing protein. (141 aa)
	TCM_039092	Uncharacterized protein. (433 aa)
	TCM_038655	CCHC-type integrase. (395 aa)
	TCM_038675	B1160F02.12 protein, putative. (111 aa)
	TCM_038736	Integrase catalytic domain-containing protein. (1486 aa)
	TCM_036947	Neurochondrin family protein isoform 1. (634 aa)
	TCM_027814	Retrotrans_gag domain-containing protein. (1001 aa)
	TCM_030164	Postsynaptic protein-related isoform 1. (96 aa)
	TCM_028175	Reverse transcriptase domain-containing protein. (239 aa)
	TCM_028107	DNA/RNA polymerases superfamily protein. (679 aa)
	TCM_028292	DNA/RNA polymerases superfamily protein. (1290 aa)
	TCM_028160	Integrase catalytic domain-containing protein. (692 aa)
	TCM_013681	DNA/RNA polymerases superfamily protein. (1188 aa)
	TCM_044444	Reverse transcriptase domain-containing protein. (453 aa)
	TCM_044274	Integrase catalytic domain-containing protein. (860 aa)
	TCM_012821	Integrase catalytic domain-containing protein. (153 aa)
	TCM_013118	Uncharacterized protein. (144 aa)
	TCM_013057	DNA/RNA polymerases superfamily protein. (878 aa)
	TCM_013563	Uncharacterized protein. (296 aa)
	TCM_013447	Reverse transcriptase domain-containing protein. (276 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_002485	TCM_008507	A0A061DNG0	A0A061E451	DNA/RNA polymerases superfamily protein.	Integrase catalytic domain-containing protein.	0.402
TCM_002485	TCM_012821	A0A061DNG0	A0A061FWT6	DNA/RNA polymerases superfamily protein.	Integrase catalytic domain-containing protein.	0.467
TCM_002485	TCM_036100	A0A061DNG0	A0A061FI17	DNA/RNA polymerases superfamily protein.	Integrase catalytic domain-containing protein.	0.469
TCM_003206	TCM_008503	A0A061DMP8	A0A061EBT0	Integrase catalytic domain-containing protein.	CCHC-type integrase-like protein.	0.493
TCM_003206	TCM_008913	A0A061DMP8	A0A061E5J9	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.413
TCM_003206	TCM_013205	A0A061DMP8	A0A061FVE9	Integrase catalytic domain-containing protein.	CCHC-type integrase, putative.	0.490
TCM_003206	TCM_036055	A0A061DMP8	A0A061FIQ6	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.437
TCM_003206	TCM_036130	A0A061DMP8	A0A061FI28	Integrase catalytic domain-containing protein.	CCHC-type integrase.	0.488
TCM_003206	TCM_038545	A0A061DMP8	A0A061GR13	Integrase catalytic domain-containing protein.	Reverse transcriptase domain-containing protein.	0.470
TCM_003206	TCM_043494	A0A061DMP8	A0A061FQL0	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.405
TCM_003206	TCM_043731	A0A061DMP8	A0A061FPR4	Integrase catalytic domain-containing protein.	Uncharacterized protein.	0.436
TCM_003206	TCM_044982	A0A061DMP8	A0A061FSS5	Integrase catalytic domain-containing protein.	Retrotransposon protein.	0.462
TCM_003220	TCM_008503	A0A061DNT9	A0A061EBT0	Gag protease polyprotein.	CCHC-type integrase-like protein.	0.472
TCM_003220	TCM_008913	A0A061DNT9	A0A061E5J9	Gag protease polyprotein.	Uncharacterized protein.	0.435
TCM_003220	TCM_009505	A0A061DNT9	A0A061E507	Gag protease polyprotein.	Retrotransposon protein.	0.574
TCM_003220	TCM_009605	A0A061DNT9	A0A061E510	Gag protease polyprotein.	Uncharacterized protein.	0.470
TCM_003220	TCM_013118	A0A061DNT9	A0A061FWN9	Gag protease polyprotein.	Uncharacterized protein.	0.481
TCM_003220	TCM_013205	A0A061DNT9	A0A061FVE9	Gag protease polyprotein.	CCHC-type integrase, putative.	0.469
TCM_003220	TCM_013447	A0A061DNT9	A0A061FVM4	Gag protease polyprotein.	Reverse transcriptase domain-containing protein.	0.473
TCM_003220	TCM_018051	A0A061DNT9	A0A061EEB7	Gag protease polyprotein.	Reverse transcriptase domain-containing protein.	0.485