11 items (Theobroma cacao) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_000813	CCCH-type zinc fingerfamily protein with RNA-binding domain. (495 aa)
	TCM_001446	Tetratricopeptide repeat (TPR)-like superfamily protein, putative. (167 aa)
	TCM_001641	ATPase E1. (172 aa)
	TCM_001431	Ribosomal protein S5/Elongation factor G/III/V family protein. (1027 aa)
	TCM_017921	RCD one 1-like protein. (206 aa)
	TCM_034612	Poly [ADP-ribose] polymerase. (473 aa)
	TCM_045455	Crooked neck protein / cell cycle protein, putative. (387 aa)
	TCM_016407	Crooked neck protein / cell cycle protein, putative isoform 1. (701 aa)
	TCM_029973	Tetratricopeptide repeat-like superfamily protein. (1041 aa)
	TCM_041395	Ribosomal protein S5/Elongation factor G/III/V family protein. (990 aa)
	TCM_039496	Transducin/WD40 repeat-like superfamily protein. (627 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_000813	TCM_001431	A0A061DHR1	A0A061DKB2	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Ribosomal protein S5/Elongation factor G/III/V family protein.	0.791
TCM_000813	TCM_001446	A0A061DHR1	A0A061DIX5	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Tetratricopeptide repeat (TPR)-like superfamily protein, putative.	0.989
TCM_000813	TCM_001641	A0A061DHR1	A0A061DK54	CCCH-type zinc fingerfamily protein with RNA-binding domain.	ATPase E1.	0.832
TCM_000813	TCM_016407	A0A061DHR1	A0A061G6A7	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Crooked neck protein / cell cycle protein, putative isoform 1.	0.992
TCM_000813	TCM_017921	A0A061DHR1	A0A061ELR9	CCCH-type zinc fingerfamily protein with RNA-binding domain.	RCD one 1-like protein.	0.832
TCM_000813	TCM_029973	A0A061DHR1	A0A061GMQ4	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Tetratricopeptide repeat-like superfamily protein.	0.989
TCM_000813	TCM_034612	A0A061DHR1	A0A061FEY1	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Poly [ADP-ribose] polymerase.	0.832
TCM_000813	TCM_039496	A0A061DHR1	A0A061GY62	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Transducin/WD40 repeat-like superfamily protein.	0.939
TCM_000813	TCM_041395	A0A061DHR1	A0A061GU81	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Ribosomal protein S5/Elongation factor G/III/V family protein.	0.991
TCM_000813	TCM_045455	A0A061DHR1	A0A061FTG0	CCCH-type zinc fingerfamily protein with RNA-binding domain.	Crooked neck protein / cell cycle protein, putative.	0.991
TCM_001431	TCM_000813	A0A061DKB2	A0A061DHR1	Ribosomal protein S5/Elongation factor G/III/V family protein.	CCCH-type zinc fingerfamily protein with RNA-binding domain.	0.791
TCM_001431	TCM_001446	A0A061DKB2	A0A061DIX5	Ribosomal protein S5/Elongation factor G/III/V family protein.	Tetratricopeptide repeat (TPR)-like superfamily protein, putative.	0.716
TCM_001431	TCM_016407	A0A061DKB2	A0A061G6A7	Ribosomal protein S5/Elongation factor G/III/V family protein.	Crooked neck protein / cell cycle protein, putative isoform 1.	0.728
TCM_001431	TCM_029973	A0A061DKB2	A0A061GMQ4	Ribosomal protein S5/Elongation factor G/III/V family protein.	Tetratricopeptide repeat-like superfamily protein.	0.716
TCM_001431	TCM_039496	A0A061DKB2	A0A061GY62	Ribosomal protein S5/Elongation factor G/III/V family protein.	Transducin/WD40 repeat-like superfamily protein.	0.718
TCM_001431	TCM_045455	A0A061DKB2	A0A061FTG0	Ribosomal protein S5/Elongation factor G/III/V family protein.	Crooked neck protein / cell cycle protein, putative.	0.728
TCM_001446	TCM_000813	A0A061DIX5	A0A061DHR1	Tetratricopeptide repeat (TPR)-like superfamily protein, putative.	CCCH-type zinc fingerfamily protein with RNA-binding domain.	0.989
TCM_001446	TCM_001431	A0A061DIX5	A0A061DKB2	Tetratricopeptide repeat (TPR)-like superfamily protein, putative.	Ribosomal protein S5/Elongation factor G/III/V family protein.	0.716
TCM_001446	TCM_001641	A0A061DIX5	A0A061DK54	Tetratricopeptide repeat (TPR)-like superfamily protein, putative.	ATPase E1.	0.912
TCM_001446	TCM_016407	A0A061DIX5	A0A061G6A7	Tetratricopeptide repeat (TPR)-like superfamily protein, putative.	Crooked neck protein / cell cycle protein, putative isoform 1.	0.979