STRINGSTRING
TCM_005418 TCM_005418 TCM_006469 TCM_006469 TCM_034381 TCM_034381 TCM_016188 TCM_016188 TCM_041700 TCM_041700 TCM_041719 TCM_041719 TCM_041721 TCM_041721
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_005418Cytochrome P450 87A3; Belongs to the cytochrome P450 family. (496 aa)
TCM_006469Cytochrome P450, putative; Belongs to the cytochrome P450 family. (474 aa)
TCM_034381Uncharacterized protein; Belongs to the cytochrome P450 family. (144 aa)
TCM_016188Cytochrome P450, family 87, subfamily A, polypeptide 2; Belongs to the cytochrome P450 family. (481 aa)
TCM_041700Cytochrome P450, putative isoform 1; Belongs to the cytochrome P450 family. (476 aa)
TCM_041719Cytochrome P450, putative; Belongs to the cytochrome P450 family. (478 aa)
TCM_041721Cytochrome P450, putative; Belongs to the cytochrome P450 family. (476 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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