22 items (Theobroma cacao) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_034247	DEA(D/H)-box RNA helicase family protein isoform 2; Belongs to the DEAD box helicase family. (768 aa)
	TCM_033030	DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family. (444 aa)
	TCM_033434	RNA helicase 36; Belongs to the DEAD box helicase family. (504 aa)
	TCM_030904	RNA helicase. (778 aa)
	TCM_021458	DEAD box RNA helicase family protein isoform 2. (1158 aa)
	TCM_021043	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (870 aa)
	TCM_020154	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family. (687 aa)
	TCM_016908	DEAD-box ATP-dependent RNA helicase 46 isoform 2; Belongs to the DEAD box helicase family. (772 aa)
	TCM_005373	RNAhelicase-like 8 isoform 1; Belongs to the DEAD box helicase family. (501 aa)
	TCM_004826	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (838 aa)
	TCM_012168	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family. (626 aa)
	TCM_037623	Eukaryotic translation initiation factor 4A1 isoform 1; Belongs to the DEAD box helicase family. (413 aa)
	TCM_037319	Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (412 aa)
	TCM_037320	Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (413 aa)
	TCM_016633	DEA(D/H)-box RNA helicase family protein isoform 1; Belongs to the DEAD box helicase family. (550 aa)
	TCM_029076	Eukaryotic translation initiation factor 4A1 isoform 1; Belongs to the DEAD box helicase family. (413 aa)
	TCM_029008	DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family. (505 aa)
	TCM_014481	RNA helicase. (628 aa)
	TCM_015015	DEAD-box ATP-dependent RNA helicase 7. (1077 aa)
	TCM_045471	RNA helicase. (599 aa)
	TCM_042754	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (1167 aa)
	TCM_042444	RNA helicase. (591 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_004826	TCM_042754	A0A061DRF4	A0A061FTT0	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1.	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1.	0.649
TCM_012168	TCM_014481	A0A061FVC8	A0A061G5G3	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family.	RNA helicase.	0.413
TCM_012168	TCM_021043	A0A061FVC8	A0A061ENN0	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family.	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1.	0.499
TCM_012168	TCM_030904	A0A061FVC8	A0A061F677	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family.	RNA helicase.	0.501
TCM_012168	TCM_033434	A0A061FVC8	A0A061F9X1	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family.	RNA helicase 36; Belongs to the DEAD box helicase family.	0.402
TCM_012168	TCM_034247	A0A061FVC8	A0A061FEB0	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family.	DEA(D/H)-box RNA helicase family protein isoform 2; Belongs to the DEAD box helicase family.	0.504
TCM_012168	TCM_045471	A0A061FVC8	A0A061FZ38	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family.	RNA helicase.	0.477
TCM_014481	TCM_012168	A0A061G5G3	A0A061FVC8	RNA helicase.	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family.	0.413
TCM_014481	TCM_015015	A0A061G5G3	A0A061G0A9	RNA helicase.	DEAD-box ATP-dependent RNA helicase 7.	0.410
TCM_014481	TCM_016633	A0A061G5G3	A0A061GE08	RNA helicase.	DEA(D/H)-box RNA helicase family protein isoform 1; Belongs to the DEAD box helicase family.	0.410
TCM_014481	TCM_016908	A0A061G5G3	A0A061EJG4	RNA helicase.	DEAD-box ATP-dependent RNA helicase 46 isoform 2; Belongs to the DEAD box helicase family.	0.415
TCM_014481	TCM_021043	A0A061G5G3	A0A061ENN0	RNA helicase.	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1.	0.767
TCM_014481	TCM_021458	A0A061G5G3	A0A061ER62	RNA helicase.	DEAD box RNA helicase family protein isoform 2.	0.414
TCM_014481	TCM_030904	A0A061G5G3	A0A061F677	RNA helicase.	RNA helicase.	0.814
TCM_014481	TCM_033030	A0A061G5G3	A0A061FAT5	RNA helicase.	DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family.	0.425
TCM_014481	TCM_034247	A0A061G5G3	A0A061FEB0	RNA helicase.	DEA(D/H)-box RNA helicase family protein isoform 2; Belongs to the DEAD box helicase family.	0.633
TCM_014481	TCM_042444	A0A061G5G3	A0A061FKV9	RNA helicase.	RNA helicase.	0.661
TCM_014481	TCM_045471	A0A061G5G3	A0A061FZ38	RNA helicase.	RNA helicase.	0.521
TCM_015015	TCM_014481	A0A061G0A9	A0A061G5G3	DEAD-box ATP-dependent RNA helicase 7.	RNA helicase.	0.410
TCM_015015	TCM_021043	A0A061G0A9	A0A061ENN0	DEAD-box ATP-dependent RNA helicase 7.	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1.	0.505