STRINGSTRING
TCM_000019 TCM_000019 TCM_016289 TCM_016289 TCM_016246 TCM_016246 TCM_037452 TCM_037452 TCM_020322 TCM_020322 TCM_020300 TCM_020300 TCM_030511 TCM_030511 TCM_034318 TCM_034318 TCM_020305 TCM_020305 TCM_034809 TCM_034809 TCM_007605 TCM_007605 TCM_005304 TCM_005304
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_000019ARID/BRIGHT DNA-binding domain-containing protein, putative. (524 aa)
TCM_016289ARID/BRIGHT DNA-binding domain,ELM2 domain protein, putative. (616 aa)
TCM_016246Transcription factor jumonji domain-containing protein, putative isoform 1. (1850 aa)
TCM_037452ARID/BRIGHT DNA-binding domain-containing protein isoform 1. (746 aa)
TCM_020322HMG box protein with ARID/BRIGHT DNA-binding domain isoform 1. (469 aa)
TCM_020300HMG (High mobility group) box with ARID/BRIGHT DNA-binding domain-like protein. (450 aa)
TCM_030511High mobility group family. (310 aa)
TCM_034318High mobility group family isoform 1. (336 aa)
TCM_020305HMG (High mobility group) box with ARID/BRIGHT DNA-binding domain-like protein. (337 aa)
TCM_034809ARID/BRIGHT DNA-binding domain-containing protein isoform 3. (465 aa)
TCM_007605ARID/BRIGHT DNA-binding domain-containing protein isoform 1. (503 aa)
TCM_005304ARID/BRIGHT DNA-binding domain,ELM2 domain protein, putative isoform 3. (676 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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