STRINGSTRING
TCM_016301 TCM_016301 TCM_012528 TCM_012528 TCM_042754 TCM_042754 TCM_045563 TCM_045563 TCM_036398 TCM_036398 TCM_036301 TCM_036301 TCM_045253 TCM_045253 TCM_044716 TCM_044716 TCM_044495 TCM_044495 TCM_043270 TCM_043270 TCM_042431 TCM_042431 TCM_042444 TCM_042444 TCM_036535 TCM_036535 TCM_036045 TCM_036045 TCM_035323 TCM_035323 TCM_035812 TCM_035812 TCM_034247 TCM_034247 TCM_042089 TCM_042089 TCM_034192 TCM_034192 TCM_026744 TCM_026744 TCM_033030 TCM_033030 TCM_032899 TCM_032899 TCM_033434 TCM_033434 TCM_025757 TCM_025757 TCM_030904 TCM_030904 TCM_025077 TCM_025077 TCM_026871 TCM_026871 TCM_026643 TCM_026643 TCM_026141 TCM_026141 TCM_025136 TCM_025136 TCM_025006 TCM_025006 TCM_025106 TCM_025106 TCM_024548 TCM_024548 TCM_022976 TCM_022976 TCM_023835 TCM_023835 LOS4 LOS4 TCM_022181 TCM_022181 TCM_022104 TCM_022104 TCM_021458 TCM_021458 TCM_021151 TCM_021151 TCM_021043 TCM_021043 TCM_021118 TCM_021118 TCM_020832 TCM_020832 TCM_020550 TCM_020550 TCM_020670 TCM_020670 TCM_020566 TCM_020566 TCM_017386 TCM_017386 TCM_020154 TCM_020154 TCM_016908 TCM_016908 TCM_011517 TCM_011517 TCM_011139 TCM_011139 TCM_010767 TCM_010767 TCM_018504 TCM_018504 TCM_017425 TCM_017425 TCM_016933 TCM_016933 TCM_011915 TCM_011915 TCM_008137 TCM_008137 TCM_014243 TCM_014243 TCM_016214 TCM_016214 TCM_041685 TCM_041685 TCM_041526 TCM_041526 TCM_038054 TCM_038054 TCM_040183 TCM_040183 TCM_040842 TCM_040842 TCM_037118 TCM_037118 TCM_037623 TCM_037623 TCM_014481 TCM_014481 TCM_016748 TCM_016748 TCM_037319 TCM_037319 TCM_037320 TCM_037320 TCM_037013 TCM_037013 TCM_037134 TCM_037134 TCM_037410 TCM_037410 TCM_036924 TCM_036924 TCM_029940 TCM_029940 TCM_000111 TCM_000111 TCM_000405 TCM_000405 TCM_000848 TCM_000848 TCM_001501 TCM_001501 TCM_001034 TCM_001034 TCM_001895 TCM_001895 TCM_003990 TCM_003990 TCM_004652 TCM_004652 TCM_004727 TCM_004727 TCM_005306 TCM_005306 TCM_005373 TCM_005373 TCM_046992 TCM_046992 TCM_006024 TCM_006024 TCM_006225 TCM_006225 TCM_006828 TCM_006828 TCM_005016 TCM_005016 TCM_007044 TCM_007044 TCM_005166 TCM_005166 TCM_006933 TCM_006933 TCM_007664 TCM_007664 TCM_010129 TCM_010129 TCM_009016 TCM_009016 TCM_010200 TCM_010200 TCM_010869 TCM_010869 TCM_010780 TCM_010780 TCM_007746 TCM_007746 TCM_004856 TCM_004856 TCM_004826 TCM_004826 TCM_001934 TCM_001934 TCM_029762 TCM_029762 TCM_029423 TCM_029423 TCM_016633 TCM_016633 TCM_029076 TCM_029076 TCM_029008 TCM_029008 TCM_027106 TCM_027106 TCM_027151 TCM_027151 TCM_016200 TCM_016200 TCM_014166 TCM_014166 TCM_045030 TCM_045030 TCM_045471 TCM_045471 TCM_015015 TCM_015015 TCM_039723 TCM_039723 TCM_014152 TCM_014152 TCM_014362 TCM_014362 TCM_012168 TCM_012168
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_016301Xeroderma pigmentosum complementation group B 1 isoform 1. (771 aa)
TCM_012528DEA(D/H)-box RNA helicase family protein isoform 1. (1193 aa)
TCM_042754P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (1167 aa)
TCM_045563Zinc ion binding,DNA binding,helicases,ATP binding,nucleic acid binding isoform 1. (1682 aa)
TCM_036398DEAD/DEAH box RNA helicase family protein, putative isoform 1. (1414 aa)
TCM_036301Chromatin remodeling 31, putative. (1003 aa)
TCM_045253F-box protein At3g54460. (1347 aa)
TCM_044716DEAD-box ATP-dependent RNA helicase 35 isoform 1. (653 aa)
TCM_044495DEA(D/H)-box RNA helicase family protein isoform 1. (1142 aa)
TCM_043270RNA helicase family protein. (1389 aa)
TCM_042431Chromatin remodeling complex subunit isoform 1. (1261 aa)
TCM_042444RNA helicase. (591 aa)
TCM_036535Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1. (1168 aa)
TCM_036045DEA(D/H)-box RNA helicase family protein. (639 aa)
TCM_035323DEAD-box ATP-dependent RNA helicase 29. (792 aa)
TCM_035812DEAD-box ATP-dependent RNA helicase 39 isoform 1. (617 aa)
TCM_034247DEA(D/H)-box RNA helicase family protein isoform 2; Belongs to the DEAD box helicase family. (768 aa)
TCM_042089Chromatin remodeling complex subunit, putative isoform 2. (2585 aa)
TCM_034192Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 1. (1185 aa)
TCM_026744ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (614 aa)
TCM_033030DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family. (444 aa)
TCM_032899Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 isoform 1. (1279 aa)
TCM_033434RNA helicase 36; Belongs to the DEAD box helicase family. (504 aa)
TCM_025757DNA binding,ATP binding,nucleic acid bindin isoform 1. (2135 aa)
TCM_030904RNA helicase. (778 aa)
TCM_025077SNF2 domain-containing protein / helicase domain-containing protein isoform 1. (2043 aa)
TCM_026871DEAD box RNA helicase isoform 1. (742 aa)
TCM_026643ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (880 aa)
TCM_026141Chromatin remodeling complex subunit isoform 1. (1521 aa)
TCM_025136Chromatin remodeling factor18 isoform 2. (735 aa)
TCM_025006P-loop containing nucleoside triphosphate hydrolases superfamily protein. (617 aa)
TCM_025106Dicer-like protein isoform 1; Belongs to the helicase family. Dicer subfamily. (1418 aa)
TCM_024548Chromatin remodeling complex subunit isoform 1. (1536 aa)
TCM_022976RNA helicase family protein isoform 1. (1037 aa)
TCM_023835DNA/RNA helicase protein. (906 aa)
LOS4P-loop containing nucleoside triphosphate hydrolases superfamily protein. (502 aa)
TCM_022181Chromatin remodeling complex subunit-like protein isoform 1. (1961 aa)
TCM_022104P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (532 aa)
TCM_021458DEAD box RNA helicase family protein isoform 2. (1158 aa)
TCM_021151Chromatin-remodeling protein 11 isoform 1. (1063 aa)
TCM_021043P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (870 aa)
TCM_021118P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (3678 aa)
TCM_020832Helicase protein with RING/U-box domain. (1125 aa)
TCM_020550P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (477 aa)
TCM_020670ATP-dependent RNA and DNA helicase, putative isoform 4. (571 aa)
TCM_020566Chromatin remodeling complex subunit isoform 1. (1127 aa)
TCM_017386DEAD/DEAH box helicase. (1251 aa)
TCM_020154P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family. (687 aa)
TCM_016908DEAD-box ATP-dependent RNA helicase 46 isoform 2; Belongs to the DEAD box helicase family. (772 aa)
TCM_011517RNA helicase family protein isoform 1. (764 aa)
TCM_011139SNF2 domain-containing protein / helicase domain-containing protein isoform 3. (737 aa)
TCM_010767DEAD/DEAH box RNA helicase family protein isoform 1. (1046 aa)
TCM_018504ATP-dependent RNA helicase SUPV3L1 isoform 2. (889 aa)
TCM_017425P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (543 aa)
TCM_016933ATP binding,ATP-dependent helicases,DNA helicases. (1252 aa)
TCM_011915Helicase protein with RING/U-box domain isoform 1. (896 aa)
TCM_008137Switch 2. (886 aa)
TCM_014243U5 small nuclear ribonucleoprotein helicase isoform 1. (2099 aa)
TCM_016214DEA(D/H)-box RNA helicase family protein isoform 1. (837 aa)
TCM_041685RNA helicase, ATP-dependent, SK12/DOB1 protein isoform 1. (1441 aa)
TCM_041526DNA/RNA helicase protein isoform 1. (1034 aa)
TCM_038054P-loop containing nucleoside triphosphate hydrolases superfamily protein. (628 aa)
TCM_040183Dead box ATP-dependent RNA helicase, putative isoform 1. (622 aa)
TCM_040842Chromatin remodeling complex subunit isoform 2. (1810 aa)
TCM_037118Dicer-like protein, putative isoform 1; Belongs to the helicase family. Dicer subfamily. (1690 aa)
TCM_037623Eukaryotic translation initiation factor 4A1 isoform 1; Belongs to the DEAD box helicase family. (413 aa)
TCM_014481RNA helicase. (628 aa)
TCM_016748ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (709 aa)
TCM_037319Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (412 aa)
TCM_037320Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (413 aa)
TCM_037013DEAD/DEAH box RNA helicase family protein isoform 1. (485 aa)
TCM_037134Helicase and polymerase-containing protein TEBICHI. (2146 aa)
TCM_037410Ribonuclease III, putative isoform 1; Belongs to the helicase family. Dicer subfamily. (1639 aa)
TCM_036924Chromatin remodeling factor CHD3 isoform 2. (1404 aa)
TCM_029940Helicase-like transcription factor CHR28. (1382 aa)
TCM_000111ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily. (746 aa)
TCM_000405Chromatin remodeling 1 isoform 1. (754 aa)
TCM_000848P-loop containing nucleoside triphosphate hydrolases superfamily protein. (618 aa)
TCM_001501Chromatin remodeling 24. (1060 aa)
TCM_001034ATP-dependent RNA helicase DEAH11, chloroplastic. (1758 aa)
TCM_001895DEAD-box ATP-dependent RNA helicase 53 isoform 3. (635 aa)
TCM_003990DNA excision repair protein E. (1228 aa)
TCM_004652ATP-dependent RNA helicase, putative. (1022 aa)
TCM_004727RNA helicase family protein, putative. (1264 aa)
TCM_005306Chromatin remodeling complex subunit. (2267 aa)
TCM_005373RNAhelicase-like 8 isoform 1; Belongs to the DEAD box helicase family. (501 aa)
TCM_046992SNF2 domain-containing protein / helicase domain-containing protein. (867 aa)
TCM_006024Chromatin remodeling complex subunit. (2342 aa)
TCM_006225ATP-dependent RNA helicase, putative isoform 1. (1457 aa)
TCM_006828SNF2 domain-containing protein / helicase domain-containing protein, putative isoform 1. (899 aa)
TCM_005016Dicer-like 1 isoform 1; Belongs to the helicase family. Dicer subfamily. (2007 aa)
TCM_007044DNA repair and recombination protein RAD54-like isoform 1. (968 aa)
TCM_005166P-loop containing nucleoside triphosphate hydrolases superfamily protein. (793 aa)
TCM_006933DNA helicase isoform 1. (1250 aa)
TCM_007664Helicase-like transcription factor CHR28. (1117 aa)
TCM_010129DEAD/DEAH box helicase, putative isoform 1. (1167 aa)
TCM_009016DEA(D/H)-box RNA helicase family protein. (1232 aa)
TCM_010200DEA(D/H)-box RNA helicase family protein isoform 1. (585 aa)
TCM_010869DEAD/DEAH box RNA helicase family protein isoform 1. (1029 aa)
TCM_010780RNA helicase family protein isoform 1. (700 aa)
TCM_007746Eukaryotic initiation factor 4A-III isoform 1. (406 aa)
TCM_004856Pre-mRNA-splicing factor ATP-dependent RNA helicase isoform 3. (746 aa)
TCM_004826P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (838 aa)
TCM_001934ATP-dependent RNA helicase, putative isoform 1. (1207 aa)
TCM_029762RNA helicase family protein isoform 1. (697 aa)
TCM_029423RNA helicase 1. (515 aa)
TCM_016633DEA(D/H)-box RNA helicase family protein isoform 1; Belongs to the DEAD box helicase family. (550 aa)
TCM_029076Eukaryotic translation initiation factor 4A1 isoform 1; Belongs to the DEAD box helicase family. (413 aa)
TCM_029008DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family. (505 aa)
TCM_027106RNA helicase, ATP-dependent, SK12/DOB1 protein. (987 aa)
TCM_027151DEAD/DEAH box RNA helicase family protein isoform 1. (427 aa)
TCM_016200P-loop containing nucleoside triphosphate hydrolases superfamily protein. (560 aa)
TCM_014166RNA helicase family protein isoform 2. (1055 aa)
TCM_045030U5 small nuclear ribonucleoprotein helicase, putative isoform 1. (2176 aa)
TCM_045471RNA helicase. (599 aa)
TCM_015015DEAD-box ATP-dependent RNA helicase 7. (1077 aa)
TCM_039723RNA helicase, ATP-dependent, SK12/DOB1 protein isoform 1. (990 aa)
TCM_014152DNA annealing helicase and endonuclease ZRANB3. (1217 aa)
TCM_014362Uncharacterized ATP-dependent helicase YprA. (1208 aa)
TCM_012168P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family. (626 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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