STRINGSTRING
TCM_025393 TCM_025393 TCM_004705 TCM_004705 TCM_007731 TCM_007731 TCM_010313 TCM_010313 TCM_011905 TCM_011905 TCM_016870 TCM_016870 TCM_021497 TCM_021497 TCM_029141 TCM_029141 TCM_038487 TCM_038487
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_025393Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase isoform 1. (859 aa)
TCM_004705RELA/SPOT isoform 1. (907 aa)
TCM_007731Metal-dependent phosphohydrolase isoform 1. (230 aa)
TCM_010313HD domain-containing metal-dependent phosphohydrolase family protein isoform 1. (468 aa)
TCM_011905Metal-dependent phosphohydrolase isoform 1. (263 aa)
TCM_016870HD domain-containing metal-dependent phosphohydrolase family protein isoform 1. (612 aa)
TCM_021497Ca2+-activated RelA/spot isoform 1. (577 aa)
TCM_029141RELA/SPOT. (724 aa)
TCM_038487Metal-dependent phosphohydrolase isoform 1. (269 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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