40 items (Theobroma cacao) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	TCM_004826	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (838 aa)
	TCM_035812	DEAD-box ATP-dependent RNA helicase 39 isoform 1. (617 aa)
	TCM_034247	DEA(D/H)-box RNA helicase family protein isoform 2; Belongs to the DEAD box helicase family. (768 aa)
	TCM_033030	DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family. (444 aa)
	TCM_033434	RNA helicase 36; Belongs to the DEAD box helicase family. (504 aa)
	TCM_030904	RNA helicase. (778 aa)
	TCM_025006	P-loop containing nucleoside triphosphate hydrolases superfamily protein. (617 aa)
	LOS4	P-loop containing nucleoside triphosphate hydrolases superfamily protein. (502 aa)
	TCM_022104	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (532 aa)
	TCM_021458	DEAD box RNA helicase family protein isoform 2. (1158 aa)
	TCM_021043	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (870 aa)
	TCM_020154	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family. (687 aa)
	TCM_016908	DEAD-box ATP-dependent RNA helicase 46 isoform 2; Belongs to the DEAD box helicase family. (772 aa)
	TCM_017425	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (543 aa)
	TCM_007746	Eukaryotic initiation factor 4A-III isoform 1. (406 aa)
	TCM_010200	DEA(D/H)-box RNA helicase family protein isoform 1. (585 aa)
	TCM_005166	P-loop containing nucleoside triphosphate hydrolases superfamily protein. (793 aa)
	TCM_005373	RNAhelicase-like 8 isoform 1; Belongs to the DEAD box helicase family. (501 aa)
	TCM_001895	DEAD-box ATP-dependent RNA helicase 53 isoform 3. (635 aa)
	TCM_000848	P-loop containing nucleoside triphosphate hydrolases superfamily protein. (618 aa)
	TCM_035834	Dead box ATP-dependent RNA helicase, putative isoform 2. (395 aa)
	TCM_035323	DEAD-box ATP-dependent RNA helicase 29. (792 aa)
	TCM_036045	DEA(D/H)-box RNA helicase family protein. (639 aa)
	TCM_042444	RNA helicase. (591 aa)
	TCM_044716	DEAD-box ATP-dependent RNA helicase 35 isoform 1. (653 aa)
	TCM_042754	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1. (1167 aa)
	TCM_012168	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family. (626 aa)
	TCM_045471	RNA helicase. (599 aa)
	TCM_016200	P-loop containing nucleoside triphosphate hydrolases superfamily protein. (560 aa)
	TCM_016214	DEA(D/H)-box RNA helicase family protein isoform 1. (837 aa)
	TCM_014481	RNA helicase. (628 aa)
	TCM_027151	DEAD/DEAH box RNA helicase family protein isoform 1. (427 aa)
	TCM_029008	DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family. (505 aa)
	TCM_029076	Eukaryotic translation initiation factor 4A1 isoform 1; Belongs to the DEAD box helicase family. (413 aa)
	TCM_016633	DEA(D/H)-box RNA helicase family protein isoform 1; Belongs to the DEAD box helicase family. (550 aa)
	TCM_037320	Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (413 aa)
	TCM_037319	Eukaryotic translation initiation factor 4A1; Belongs to the DEAD box helicase family. (412 aa)
	TCM_037623	Eukaryotic translation initiation factor 4A1 isoform 1; Belongs to the DEAD box helicase family. (413 aa)
	TCM_040183	Dead box ATP-dependent RNA helicase, putative isoform 1. (622 aa)
	TCM_038054	P-loop containing nucleoside triphosphate hydrolases superfamily protein. (628 aa)

Your Current Organism:

Theobroma cacao

NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
TCM_000848	TCM_001895	A0A061DHA1	A0A061DLT8	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEAD-box ATP-dependent RNA helicase 53 isoform 3.	0.559
TCM_000848	TCM_005166	A0A061DHA1	A0A061E0G6	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	0.655
TCM_000848	TCM_007746	A0A061DHA1	A0A061EA73	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	Eukaryotic initiation factor 4A-III isoform 1.	0.654
TCM_000848	TCM_012168	A0A061DHA1	A0A061FVC8	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1; Belongs to the DEAD box helicase family.	0.561
TCM_000848	TCM_014481	A0A061DHA1	A0A061G5G3	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	RNA helicase.	0.654
TCM_000848	TCM_016214	A0A061DHA1	A0A061G553	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEA(D/H)-box RNA helicase family protein isoform 1.	0.653
TCM_000848	TCM_016633	A0A061DHA1	A0A061GE08	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEA(D/H)-box RNA helicase family protein isoform 1; Belongs to the DEAD box helicase family.	0.561
TCM_000848	TCM_016908	A0A061DHA1	A0A061EJG4	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEAD-box ATP-dependent RNA helicase 46 isoform 2; Belongs to the DEAD box helicase family.	0.554
TCM_000848	TCM_021043	A0A061DHA1	A0A061ENN0	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1.	0.978
TCM_000848	TCM_021458	A0A061DHA1	A0A061ER62	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEAD box RNA helicase family protein isoform 2.	0.555
TCM_000848	TCM_022104	A0A061DHA1	A0A061ERX4	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1.	0.808
TCM_000848	TCM_029008	A0A061DHA1	A0A061GD47	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family.	0.548
TCM_000848	TCM_030904	A0A061DHA1	A0A061F677	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	RNA helicase.	0.912
TCM_000848	TCM_033030	A0A061DHA1	A0A061FAT5	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEA(D/H)-box RNA helicase family protein; Belongs to the DEAD box helicase family.	0.724
TCM_000848	TCM_033434	A0A061DHA1	A0A061F9X1	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	RNA helicase 36; Belongs to the DEAD box helicase family.	0.863
TCM_000848	TCM_034247	A0A061DHA1	A0A061FEB0	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEA(D/H)-box RNA helicase family protein isoform 2; Belongs to the DEAD box helicase family.	0.955
TCM_000848	TCM_035323	A0A061DHA1	A0A061FIJ9	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEAD-box ATP-dependent RNA helicase 29.	0.797
TCM_000848	TCM_035812	A0A061DHA1	A0A061FHR1	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEAD-box ATP-dependent RNA helicase 39 isoform 1.	0.558
TCM_000848	TCM_035834	A0A061DHA1	A0A061FHS2	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	Dead box ATP-dependent RNA helicase, putative isoform 2.	0.567
TCM_000848	TCM_036045	A0A061DHA1	A0A061FJ68	P-loop containing nucleoside triphosphate hydrolases superfamily protein.	DEA(D/H)-box RNA helicase family protein.	0.569