STRINGSTRING
TCM_037786 TCM_037786 TCM_037080 TCM_037080 TCM_027419 TCM_027419 TCM_014448 TCM_014448 TCM_014692 TCM_014692 TCM_013963 TCM_013963 TCM_025327 TCM_025327 TCM_042014 TCM_042014 TCM_022360 TCM_022360 TCM_047036 TCM_047036 TCM_017264 TCM_017264 TCM_004947 TCM_004947 TCM_001199 TCM_001199 TCM_003170 TCM_003170 TCM_001607 TCM_001607 TCM_000961 TCM_000961 TCM_039125 TCM_039125 TCM_038062 TCM_038062
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_037786tRNA/rRNA methyltransferase family protein. (590 aa)
TCM_03708040S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (138 aa)
TCM_02741940S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (138 aa)
TCM_014448Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (186 aa)
TCM_014692Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein. (258 aa)
TCM_013963Eukaryotic release factor 1-3 isoform 1. (437 aa)
TCM_025327Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (377 aa)
TCM_042014Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein. (112 aa)
TCM_022360Protein pelota homolog; May function in recognizing stalled ribosomes and triggering endonucleolytic cleavage of the mRNA, a mechanism to release non- functional ribosomes and degrade damaged mRNAs. (370 aa)
TCM_047036Eukaryotic release factor 1-3. (437 aa)
TCM_017264Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein. (259 aa)
TCM_004947Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein, putative. (176 aa)
TCM_001199Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein. (112 aa)
TCM_003170Eukaryotic release factor 1-3 isoform 1. (436 aa)
TCM_001607Eukaryotic release factor 1 (ERF1) family protein. (116 aa)
TCM_000961tRNA/rRNA methyltransferase family protein. (356 aa)
TCM_039125Ribosomal_L7Ae domain-containing protein. (155 aa)
TCM_038062Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (128 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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