STRINGSTRING
TCM_033500 TCM_033500 TCM_033816 TCM_033816 TCM_026313 TCM_026313 TCM_025877 TCM_025877 TCM_008056 TCM_008056 TCM_008054 TCM_008054 TCM_005414 TCM_005414 TCM_007242 TCM_007242 TCM_005024 TCM_005024 TCM_007000 TCM_007000 TCM_006597 TCM_006597 TCM_006540 TCM_006540 TCM_004085 TCM_004085 TCM_005026 TCM_005026 TCM_004275 TCM_004275 TCM_004565 TCM_004565 TCM_004181 TCM_004181 TCM_004750 TCM_004750 TCM_001784 TCM_001784 TCM_002056 TCM_002056 TCM_002078 TCM_002078 TCM_029630 TCM_029630 TCM_029790 TCM_029790 TCM_029789 TCM_029789 TCM_029886 TCM_029886 TCM_036807 TCM_036807 TCM_037620 TCM_037620 TCM_000149 TCM_000149 TCM_000233 TCM_000233 TCM_000610 TCM_000610 TCM_000807 TCM_000807 TCM_046819 TCM_046819 TCM_027154 TCM_027154 TCM_016615 TCM_016615 TCM_016198 TCM_016198 TCM_016610 TCM_016610 TCM_016563 TCM_016563 TCM_014243 TCM_014243 TCM_015596 TCM_015596 TCM_015522 TCM_015522 TCM_015119 TCM_015119 TCM_014171 TCM_014171 TCM_045030 TCM_045030 TCM_014570 TCM_014570 TCM_012713 TCM_012713 TCM_005931 TCM_005931 TCM_008254 TCM_008254 TCM_010876 TCM_010876 TCM_010980 TCM_010980 TCM_011279 TCM_011279 TCM_011305 TCM_011305 TCM_011666 TCM_011666 TCM_011755 TCM_011755 TCM_011635 TCM_011635 TCM_011573 TCM_011573 TCM_008842 TCM_008842 TCM_017105 TCM_017105 TCM_019130 TCM_019130 TCM_019048 TCM_019048 TCM_018684 TCM_018684 TCM_011833 TCM_011833 TCM_020700 TCM_020700 TCM_017926 TCM_017926 TCM_021183 TCM_021183 TCM_019038 TCM_019038 TCM_021541 TCM_021541 TCM_029078 TCM_029078 TCM_029118 TCM_029118 TCM_029080 TCM_029080 TCM_029474 TCM_029474 TCM_029788 TCM_029788 TCM_029499 TCM_029499 TCM_037308 TCM_037308 TCM_047089 TCM_047089 TCM_037462 TCM_037462 TCM_037635 TCM_037635 TCM_030350 TCM_030350 TCM_039204 TCM_039204 TCM_040759 TCM_040759 TCM_040763 TCM_040763 TCM_040757 TCM_040757 TCM_040889 TCM_040889 TCM_041031 TCM_041031 TCM_037888 TCM_037888 TCM_041291 TCM_041291 TCM_041435 TCM_041435 TCM_041648 TCM_041648 TCM_042031 TCM_042031 TCM_045925 TCM_045925 TCM_025552 TCM_025552 TCM_025482 TCM_025482 TCM_030951 TCM_030951 TCM_025424 TCM_025424 TCM_031069 TCM_031069 TCM_024565 TCM_024565 TCM_026561 TCM_026561 TCM_025869 TCM_025869 TCM_025871 TCM_025871 TCM_022240 TCM_022240 TCM_021956 TCM_021956 TCM_025033 TCM_025033 TCM_025213 TCM_025213 TCM_022853 TCM_022853 TCM_022341 TCM_022341 TCM_021934 TCM_021934 TCM_022446 TCM_022446 TCM_020222 TCM_020222 TCM_021658 TCM_021658 TCM_046956 TCM_046956 TCM_011971 TCM_011971 TCM_011973 TCM_011973 TCM_044687 TCM_044687 TCM_044579 TCM_044579 TCM_043099 TCM_043099 TCM_042456 TCM_042456 TCM_035789 TCM_035789 TCM_034987 TCM_034987 TCM_035137 TCM_035137 TCM_034280 TCM_034280 TCM_046885 TCM_046885 TCM_034139 TCM_034139 TCM_034273 TCM_034273 TCM_034010 TCM_034010
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_033500Ribosomal protein S19e family protein isoform 1. (143 aa)
TCM_033816Heat shock transcription factor B4. (361 aa)
TCM_026313Winged-helix DNA-binding transcription factor family protein. (212 aa)
TCM_025877Caffeic acid 3-O-methyltransferase 1 isoform 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (397 aa)
TCM_008056O-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (365 aa)
TCM_008054O-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (353 aa)
TCM_005414COP9 signalosome complex subunit 1. (541 aa)
TCM_007242Telomere repeat binding factor 1 isoform 1. (300 aa)
TCM_005024Quercetin 3-O-methyltransferase 1, putative. (230 aa)
TCM_007000RNA-binding protein, putative isoform 1. (440 aa)
TCM_006597PAM domain (PCI/PINT associated module) protein isoform 1. (484 aa)
TCM_006540RS-norcoclaurine 6-O-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (353 aa)
TCM_004085CDT1 A, putative. (616 aa)
TCM_005026Quercetin 3-O-methyltransferase 1, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (351 aa)
TCM_004275DNA binding protein, putative isoform 1. (362 aa)
TCM_004565Cullin 1; Belongs to the cullin family. (738 aa)
TCM_004181Winged-helix DNA-binding transcription factor family protein. (284 aa)
TCM_004750Histone H1, putative. (194 aa)
TCM_001784Winged-helix DNA-binding transcription factor family protein, putative. (447 aa)
TCM_002056General transcription factor IIE subunit 1 isoform 2. (480 aa)
TCM_002078Methionine aminopeptidase 2; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val). (514 aa)
TCM_029630HSF domain class transcription factor. (405 aa)
TCM_029790Flavonoid o-methyltransferase related, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (310 aa)
TCM_029789Flavonoid o-methyltransferase related, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (380 aa)
TCM_029886Tetratricopeptide repeat-like superfamily protein, putative. (679 aa)
TCM_036807Replicon protein A2, putative isoform 1. (280 aa)
TCM_037620Homeodomain-like/winged-helix DNA-binding family protein, putative. (337 aa)
TCM_000149Winged-helix DNA-binding transcription factor family protein, putative. (533 aa)
TCM_000233Histone H1-3. (195 aa)
TCM_000610Heat shock factor 4. (299 aa)
TCM_000807Homeodomain-like/winged-helix DNA-binding family protein isoform 1. (292 aa)
TCM_046819Disease resistance protein. (1501 aa)
TCM_027154DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (237 aa)
TCM_016615Proteasome component (PCI) domain protein isoform 1. (386 aa)
TCM_016198Winged-helix DNA-binding transcription factor family protein, putative isoform 1. (314 aa)
TCM_016610E2F/DP family winged-helix DNA-binding domain isoform 1. (179 aa)
TCM_016563Heat shock transcription factor A1D isoform 1. (528 aa)
TCM_014243U5 small nuclear ribonucleoprotein helicase isoform 1. (2099 aa)
TCM_015596Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (367 aa)
TCM_015522Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (365 aa)
TCM_015119Heat shock transcription factor B2A, putative. (323 aa)
TCM_014171Ribosomal protein S19e family protein isoform 1. (143 aa)
TCM_045030U5 small nuclear ribonucleoprotein helicase, putative isoform 1. (2176 aa)
TCM_01457026S proteasome, regulatory subunit Rpn7,Proteasome component (PCI) domain isoform 1. (387 aa)
TCM_012713Winged-helix DNA-binding transcription factor family protein, putative isoform 1. (403 aa)
TCM_005931Cohesin subunit rad21, putative isoform 1. (677 aa)
TCM_008254Flavonoid o-methyltransferase related; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (364 aa)
TCM_010876Uncharacterized protein isoform 1. (586 aa)
TCM_010980HMG-Y-related protein B. (190 aa)
TCM_011279Heat shock transcription factor A8, putative. (420 aa)
TCM_011305Electron transporter, putative. (653 aa)
TCM_011666Anaphase-promoting complex/cyclosome 2 isoform 2; Belongs to the cullin family. (879 aa)
TCM_011755Cullin 3; Belongs to the cullin family. (732 aa)
TCM_01163526S proteasome non-ATPase regulatory subunit 11. (422 aa)
TCM_011573Ribosomal protein S19e family protein, putative. (136 aa)
TCM_008842DNA-binding HORMA family protein. (610 aa)
TCM_017105Proteasome component domain protein. (369 aa)
TCM_019130High mobility group A isoform 2. (191 aa)
TCM_019048Leucine-rich repeat-containing protein, putative. (1068 aa)
TCM_018684Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (365 aa)
TCM_011833Hop2. (226 aa)
TCM_020700Heat stress transcription factor A-6b, putative. (360 aa)
TCM_017926DP-E2F-like 1, putative. (554 aa)
TCM_021183Cullin 1 isoform 1; Belongs to the cullin family. (744 aa)
TCM_019038Leucine-rich repeat-containing protein, putative. (1084 aa)
TCM_021541RNA-binding protein, putative isoform 3. (501 aa)
TCM_029078Homeodomain-like/winged-helix DNA-binding family protein, putative. (275 aa)
TCM_029118B-block binding subunit of TFIIIC, putative isoform 1. (1845 aa)
TCM_029080B-block binding subunit of TFIIIC, putative. (1556 aa)
TCM_029474Cullin-4B isoform 1; Belongs to the cullin family. (819 aa)
TCM_029788Flavonoid o-methyltransferase related; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (352 aa)
TCM_029499Translation initiation factor eIF-2B subunit delta, putative isoform 1. (387 aa)
TCM_037308Heat shock transcription factor A2 isoform 4. (399 aa)
TCM_047089RNA recognition motif-containing protein, putative. (454 aa)
TCM_037462Eukaryotic translation initiation factor 3 subunit K; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (235 aa)
TCM_037635Heat shock transcription factor A2, putative. (470 aa)
TCM_030350Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (549 aa)
TCM_039204Replication protein A, subunit RPA32, putative isoform 1. (275 aa)
TCM_040759Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (378 aa)
TCM_040763Caffeic acid 3-O-methyltransferase 1 isoform 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (356 aa)
TCM_040757Caffeic acid 3-O-methyltransferase 1 isoform 2; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (427 aa)
TCM_040889Heat shock transcription factor B4. (279 aa)
TCM_041031Proteasome family protein isoform 1. (439 aa)
TCM_037888Heat shock transcription factor C1, putative. (340 aa)
TCM_041291Transcription factor E2F isoform 2. (497 aa)
TCM_041435TMV resistance protein N, putative. (282 aa)
TCM_041648Cell division control protein; Belongs to the CDC6/cdc18 family. (511 aa)
TCM_042031Lupus la ribonucleoprotein, putative isoform 3. (893 aa)
TCM_045925Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (356 aa)
TCM_025552Serine/threonine kinases,ATP binding,catalytics isoform 1. (462 aa)
TCM_025482Heat shock factor protein HSF8, putative. (500 aa)
TCM_030951Vacuolar protein sorting-associated protein; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (249 aa)
TCM_025424TMV resistance protein N, putative; Belongs to the disease resistance NB-LRR family. (1199 aa)
TCM_031069DDRGK domain-containing protein 1 isoform 1. (301 aa)
TCM_024565Heat shock factor protein, putative. (233 aa)
TCM_026561Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (437 aa)
TCM_025869Caffeic acid 3-O-methyltransferase 1 isoform 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (443 aa)
TCM_025871Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (368 aa)
TCM_022240Transcription factor DP. (285 aa)
TCM_021956Transcription factor DP isoform 1; Involved in the regulation of the G1/S transition. Increases the DNA binding activity of E2F proteins after heterodimerization. Belongs to the E2F/DP family. (290 aa)
TCM_025033Eukaryotic translation initiation factor 3 subunit C; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (918 aa)
TCM_02521326S proteasome regulatory subunit (RPN5), putative isoform 2. (444 aa)
TCM_022853E2F transcription factor 3 isoform 1. (480 aa)
TCM_022341O-methyltransferase family protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (356 aa)
TCM_021934E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation. (2054 aa)
TCM_022446DNA binding protein, putative. (476 aa)
TCM_020222Winged-helix DNA-binding transcription factor family protein. (490 aa)
TCM_021658Metallopeptidase M24 family protein isoform 1. (393 aa)
TCM_046956Cullin 1; Belongs to the cullin family. (739 aa)
TCM_011971DP-E2F-like 1 isoform 1. (388 aa)
TCM_011973DP-E2F-like 1. (180 aa)
TCM_044687O-methyltransferase, putative; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (443 aa)
TCM_044579EAP30/Vps36 family protein isoform 1. (462 aa)
TCM_043099Transcription initiation factor IIF isoform 2. (263 aa)
TCM_042456Rad21/Rec8-like family protein, putative. (82 aa)
TCM_035789Rad21/Rec8-like family protein isoform 1. (887 aa)
TCM_034987Electron carriers,protein disulfide oxidoreductases. (762 aa)
TCM_035137Caffeic acid 3-O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O-methyltransferase family. (358 aa)
TCM_034280PAM domain (PCI/PINT associated module) protein isoform 1. (487 aa)
TCM_046885Winged-helix DNA-binding transcription factor family protein, putative. (425 aa)
TCM_034139JHL18I08.10 protein isoform 2. (260 aa)
TCM_034273Winged-helix DNA-binding transcription factor family protein, putative. (550 aa)
TCM_034010Proteasome component (PCI) domain protein. (397 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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