STRINGSTRING
TCM_042534 TCM_042534 TCM_017494 TCM_017494 TCM_020305 TCM_020305 TCM_020322 TCM_020322 TCM_020300 TCM_020300 TCM_021706 TCM_021706 TCM_030511 TCM_030511 TCM_031868 TCM_031868 TCM_034318 TCM_034318 TCM_034406 TCM_034406 TCM_045441 TCM_045441 TCM_045462 TCM_045462 TCM_014800 TCM_014800 TCM_016030 TCM_016030 TCM_016416 TCM_016416 TCM_029514 TCM_029514 TCM_038105 TCM_038105 TCM_041175 TCM_041175 TCM_000068 TCM_000068 TCM_005549 TCM_005549 TCM_007659 TCM_007659 TCM_010411 TCM_010411 TCM_011484 TCM_011484 TCM_018380 TCM_018380
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_042534High mobility group B1 isoform 1. (201 aa)
TCM_017494Uncharacterized protein. (492 aa)
TCM_020305HMG (High mobility group) box with ARID/BRIGHT DNA-binding domain-like protein. (337 aa)
TCM_020322HMG box protein with ARID/BRIGHT DNA-binding domain isoform 1. (469 aa)
TCM_020300HMG (High mobility group) box with ARID/BRIGHT DNA-binding domain-like protein. (450 aa)
TCM_021706High mobility group B1 isoform 3. (177 aa)
TCM_030511High mobility group family. (310 aa)
TCM_031868Plant-specific transcription factor YABBY family protein isoform 1. (181 aa)
TCM_034318High mobility group family isoform 1. (336 aa)
TCM_034406High mobility group B2, BETA 1,NFD2,NFD02 isoform 1. (147 aa)
TCM_045441HMG-box DNA-binding family protein, putative. (215 aa)
TCM_045462RING/U-box and TRAF-like domains. (639 aa)
TCM_014800High mobility group protein TDP-1, putative. (273 aa)
TCM_016030Plant-specific transcription factor YABBY family protein. (211 aa)
TCM_016416High mobility group family isoform 1. (502 aa)
TCM_029514HMG-box DNA-binding family protein isoform 1. (168 aa)
TCM_038105Plant-specific transcription factor YABBY family protein isoform 1. (184 aa)
TCM_041175Plant-specific transcription factor YABBY family protein isoform 1. (182 aa)
TCM_000068High mobility group B4, putative. (145 aa)
TCM_005549Plant-specific transcription factor YABBY family protein isoform 1. (212 aa)
TCM_007659High-mobility group box 6. (210 aa)
TCM_010411Plant-specific transcription factor YABBY family protein. (245 aa)
TCM_011484Plant-specific transcription factor YABBY family protein. (238 aa)
TCM_018380FACT complex subunit SSRP1; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment o [...] (640 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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