STRINGSTRING
TCM_037367 TCM_037367 TCM_012179 TCM_012179 TCM_026561 TCM_026561 TCM_007621 TCM_007621 TCM_001405 TCM_001405 TCM_041482 TCM_041482 TCM_014710 TCM_014710
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
TCM_037367Photosystem II subunit X. (122 aa)
TCM_012179Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (470 aa)
TCM_026561Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (437 aa)
TCM_007621Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (499 aa)
TCM_001405Amino acid kinase family protein. (340 aa)
TCM_041482Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (456 aa)
TCM_014710Bidirectional sugar transporter SWEET; Mediates both low-affinity uptake and efflux of sugar across the membrane; Belongs to the SWEET sugar transporter family. (285 aa)
Your Current Organism:
Theobroma cacao
NCBI taxonomy Id: 3641
Other names: T. cacao, Theobroma cacao L., cacao, chocolate, cocoa
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