(23 nodes) Mixed, incl. CoA-transferase family III domain 3 superfamily, and Acyl-CoA dehydrogenase, C-terminal domain network (Ramlibacter tataouinensis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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Others

textmining

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protein homology

Your Input:
	Rta_14120	Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family. (300 aa)
	Rta_14130	Hypothetical protein. (71 aa)
	Rta_14140	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase). (387 aa)
	Rta_14150	Conserved hypothetical protein. (127 aa)
	Rta_14160	Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family. (401 aa)
	tctC-22	Candidate extracytoplasmic binding receptor. (320 aa)
	Rta_14180	Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family. (386 aa)
	Rta_14190	Citrate lyase beta chain, citryl-CoA lyase subunit-like protein; Belongs to the HpcH/HpaI aldolase family. (291 aa)
	Rta_14200	Conserved hypothetical protein. (288 aa)
	Rta_14210	acyl-CoA dehydrogenase-like protein. (401 aa)
	Rta_14230	Conserved hypothetical protein. (447 aa)
	tctC-23	Candidate extracytoplasmic binding receptor. (323 aa)
	Rta_14250	Hypothetical protein. (77 aa)
	Rta_14270	Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family. (408 aa)
	Rta_14280	Conserved hypothetical protein. (224 aa)
	tctC-24	Candidate extracytoplasmic binding receptor. (324 aa)
	Rta_16590	Hypothetical protein. (62 aa)
	tctC-31	Candidate extracytoplasmic binding receptor. (330 aa)
	Rta_16620	Conserved hypothetical protein. (295 aa)
	Rta_16630	acyl-CoA dehydrogenase-like protein. (389 aa)
	Rta_16640	Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family. (392 aa)
	Rta_16650	Conserved hypothetical protein. (451 aa)
	Rta_28050	(Citrate (pro-3S)-lyase beta chain) (Citryl-CoA lyase subunit); Belongs to the HpcH/HpaI aldolase family. (299 aa)

Your Current Organism:

Ramlibacter tataouinensis

NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Rta_14120	Rta_14130	Rta_14120	Rta_14130	Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.	Hypothetical protein.	0.697
Rta_14120	Rta_14140	Rta_14120	Rta_14140	Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	0.518
Rta_14120	Rta_14150	Rta_14120	Rta_14150	Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.	Conserved hypothetical protein.	0.516
Rta_14120	Rta_14160	Rta_14120	Rta_14160	Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.	Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family.	0.516
Rta_14120	tctC-22	Rta_14120	Rta_14170	Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.	Candidate extracytoplasmic binding receptor.	0.431
Rta_14130	Rta_14120	Rta_14130	Rta_14120	Hypothetical protein.	Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.	0.697
Rta_14130	Rta_14140	Rta_14130	Rta_14140	Hypothetical protein.	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	0.568
Rta_14130	Rta_14150	Rta_14130	Rta_14150	Hypothetical protein.	Conserved hypothetical protein.	0.568
Rta_14130	Rta_14160	Rta_14130	Rta_14160	Hypothetical protein.	Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family.	0.568
Rta_14130	tctC-22	Rta_14130	Rta_14170	Hypothetical protein.	Candidate extracytoplasmic binding receptor.	0.471
Rta_14140	Rta_14120	Rta_14140	Rta_14120	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	Transcriptional regulator, LysR family-like protein; Belongs to the LysR transcriptional regulatory family.	0.518
Rta_14140	Rta_14130	Rta_14140	Rta_14130	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	Hypothetical protein.	0.568
Rta_14140	Rta_14150	Rta_14140	Rta_14150	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	Conserved hypothetical protein.	0.812
Rta_14140	Rta_14160	Rta_14140	Rta_14160	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family.	0.823
Rta_14140	Rta_14180	Rta_14140	Rta_14180	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	Formyl-coenzyme A transferase (Formyl-CoA transferase)-like protein; Belongs to the CoA-transferase III family.	0.514
Rta_14140	Rta_14190	Rta_14140	Rta_14190	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	Citrate lyase beta chain, citryl-CoA lyase subunit-like protein; Belongs to the HpcH/HpaI aldolase family.	0.441
Rta_14140	Rta_14200	Rta_14140	Rta_14200	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	Conserved hypothetical protein.	0.605
Rta_14140	Rta_14210	Rta_14140	Rta_14210	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	acyl-CoA dehydrogenase-like protein.	0.439
Rta_14140	Rta_14230	Rta_14140	Rta_14230	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	Conserved hypothetical protein.	0.472
Rta_14140	tctC-22	Rta_14140	Rta_14170	Butyryl-CoA dehydrogenase (Short-chain-acyl-CoA dehydrogenase)-like protein; (Unsaturated acyl-CoA reductase) (Butyryl dehydrogenase).	Candidate extracytoplasmic binding receptor.	0.631

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