STRINGSTRING
Rta_03060 Rta_03060 Rta_04580 Rta_04580 Rta_05020 Rta_05020 Rta_05030 Rta_05030 galK galK glf glf Rta_12940 Rta_12940 Rta_16810 Rta_16810 Rta_17710 Rta_17710 Rta_17760 Rta_17760 Rta_21420 Rta_21420 Rta_32800 Rta_32800
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rta_03060Candidate b-glycosidase, Glycoside Hydrolase Family 1; Belongs to the glycosyl hydrolase 1 family. (733 aa)
Rta_04580Candidate b-glycosidase, Glycoside Hydrolase Family 1; Belongs to the glycosyl hydrolase 1 family. (418 aa)
Rta_05020Candidate b-glycosidase, Glycoside Hydrolase Family 2; Belongs to the glycosyl hydrolase 2 family. (593 aa)
Rta_05030Gal-1-P uridylyltransferase; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family. (362 aa)
galKCandidate galactokinase (Galactose kinase); Belongs to the GHMP kinase family. GalK subfamily. (353 aa)
glfCandidate UDP-galactopyranose mutase. (401 aa)
Rta_12940Conserved hypothetical protein. (197 aa)
Rta_16810B-xylosidase/arabinofuranosidase, Glycoside Hydrolase Family 43-like protein; Belongs to the glycosyl hydrolase 43 family. (373 aa)
Rta_17710Conserved hypothetical protein. (282 aa)
Rta_17760Conserved hypothetical protein. (183 aa)
Rta_21420Conserved hypothetical protein. (361 aa)
Rta_32800A-glycosyltransferase, Glycosyltransferase Family 4-like protein. (400 aa)
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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