STRINGSTRING
fadA fadA Rta_09250 Rta_09250 argJ argJ plsY plsY argA argA dapD dapD Rta_21470 Rta_21470 Rta_22110 Rta_22110 phnO phnO Rta_25520 Rta_25520 Rta_25640 Rta_25640 Rta_26030 Rta_26030 gcp gcp cysE cysE Rta_27940 Rta_27940 fabF fabF fabD fabD fabH fabH plsX plsX Rta_29530 Rta_29530 Rta_30410 Rta_30410 Rta_30420 Rta_30420 Rta_32310 Rta_32310 Rta_33880 Rta_33880 Rta_33970 Rta_33970 plsC-2 plsC-2 Rta_36030 Rta_36030 Rta_36680 Rta_36680 bkdB bkdB Rta_10640 Rta_10640 Rta_11440 Rta_11440 Rta_12070 Rta_12070 Rta_12090 Rta_12090 Rta_13270 Rta_13270 Rta_16230 Rta_16230 lpxD lpxD fabZ fabZ lpxA lpxA Rta_18100 Rta_18100 aceF aceF sucB sucB fabI fabI Rta_19870 Rta_19870 Rta_20040 Rta_20040 Rta_20240 Rta_20240 metX metX Rta_01580 Rta_01580 Rta_01620 Rta_01620 Rta_02440 Rta_02440 Rta_02540 Rta_02540 fabB fabB Rta_02670 Rta_02670 Rta_02900 Rta_02900 Rta_03370 Rta_03370 lipB lipB Rta_04120 Rta_04120 Rta_04655 Rta_04655 Rta_04890 Rta_04890 Rta_05520 Rta_05520 lnt lnt Rta_05680 Rta_05680 Rta_06010 Rta_06010 Rta_06020 Rta_06020 glmU glmU Rta_08490 Rta_08490
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
fadA3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
Rta_09250Conserved hypothetical protein. (104 aa)
argJOrnithine transacetylase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family. (408 aa)
plsYCandidate membrane protein; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP. (209 aa)
argACandidate amino-acid acetyltransferase (N-acetylglutamate synthase); Belongs to the acetyltransferase family. ArgA subfamily. (469 aa)
dapDTetrahydropicolinate succinylase; Belongs to the transferase hexapeptide repeat family. (274 aa)
Rta_21470Candidate aminoglycoside N(3)-acetyltransferase III (ACC(3)-III); (Aminocyclitol 3-N-acetyltransferase type III) (Gentamicin-(3)- N-acetyl-transferase). (223 aa)
Rta_22110Acyltransferase, membrane protein-like protein. (646 aa)
phnOCandidate PhnO protein. (142 aa)
Rta_25520Conserved hypothetical protein. (357 aa)
Rta_25640Spermidine N(1)-acetyltransferase (Diamine acetyltransferase)-like protein. (186 aa)
Rta_26030Phosphinothricin N-acetyltransferase (Phosphinothricin-resistance protein)-like protein. (173 aa)
gcpCandidate O-sialoglycoprotein endopeptidase (Glycoprotease); Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. (346 aa)
cysECandidate serine acetyltransferase. (257 aa)
Rta_27940Candidate membrane protein. (898 aa)
fabFCandidate 3-oxoacyl-[acyl-carrier-protein] synthase (Beta-ketoacyl-ACP synthase); Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (414 aa)
fabDCandidate [Acyl-carrier-protein] S-malonyltransferase. (301 aa)
fabHCandidate 3-oxoacyl-[acyl-carrier-protein] synthase (Beta-ketoacyl-ACP synthase); Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like sup [...] (325 aa)
plsXCandidate fatty acid/phospholipid synthesis protein plsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (341 aa)
Rta_29530Acetyltransferase-like protein. (198 aa)
Rta_30410Polyketide synthase-like protein. (2108 aa)
Rta_30420MelG protein (non-ribosomal peptide synthetase)-like protein. (1519 aa)
Rta_32310Conserved hypothetical protein. (150 aa)
Rta_33880Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
Rta_33970Candidate acetyltransferase. (199 aa)
plsC-2Candidate 1-acylglycerol-3-phosphate O-acyltransferase (lyso-phosphatidic acid acyltransferase). (245 aa)
Rta_36030Acetyltransferase-like protein. (162 aa)
Rta_36680Ribosomal-protein-alanine acetyltransferase-like protein. (156 aa)
bkdBCandidate Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex. (435 aa)
Rta_10640Conserved hypothetical protein. (226 aa)
Rta_11440Conserved hypothetical protein. (114 aa)
Rta_12070Conserved hypothetical protein. (177 aa)
Rta_12090Candidate antibiotic resistance protein (acetyltransferase). (177 aa)
Rta_13270Acetyltransferases-like protein. (382 aa)
Rta_16230Acetyltransferases-like protein. (151 aa)
lpxDCandidate UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily. (325 aa)
fabZ3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases-like protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (156 aa)
lpxACandidate Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. (265 aa)
Rta_18100Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
aceFDihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (567 aa)
sucBDihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (427 aa)
fabICandidate Enoyl-[acyl-carrier-protein] reductase (NADH). (277 aa)
Rta_19870Conserved hypothetical protein. (292 aa)
Rta_200403-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
Rta_20240Candidate membrane protein. (246 aa)
metXHomoserine transacetylase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine. (376 aa)
Rta_01580Candidate membrane protein. (396 aa)
Rta_01620Acetyltransferase-like protein. (266 aa)
Rta_02440Conserved hypothetical protein. (410 aa)
Rta_02540Candidate acyl-coenzyme A synthetases/AMP-(fatty) acid ligase. (558 aa)
fabBCandidate 3-oxoacyl-[acyl-carrier-protein] synthase I (Beta-ketoacyl-ACP synthase); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (414 aa)
Rta_026701-acylglycerol-3-phosphate O-acyltransferase-like protein. (258 aa)
Rta_02900Candidate membrane protein. (367 aa)
Rta_03370Conserved hypothetical protein. (146 aa)
lipBCandidate lipoate-protein ligase B (Lipoate biosynthesis protein B); Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. (226 aa)
Rta_04120Candidate 3-oxoacyl-[acyl-carrier-protein] synthase (Beta-ketoacyl-ACP synthase). (648 aa)
Rta_04655Conserved hypothetical protein. (190 aa)
Rta_04890Candidate 3-oxoacyl-[acyl-carrier-protein] synthase (Beta-ketoacyl-ACP synthase). (339 aa)
Rta_05520Conserved hypothetical protein. (217 aa)
lntCandidate apolipoprotein N-acyltransferase (ALP N-acyltransferase), membrane protein; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily. (532 aa)
Rta_05680Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
Rta_06010Conserved hypothetical protein. (108 aa)
Rta_06020Conserved hypothetical protein. (301 aa)
glmUCandidate Bifunctional glmU protein; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain. (467 aa)
Rta_08490Delta-ALA synthetase. (418 aa)
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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