STRINGSTRING
Rta_02850 Rta_02850 Rta_03740 Rta_03740 xthC xthC Rta_04060 Rta_04060 Rta_04400 Rta_04400 Rta_05570 Rta_05570 Rta_04430 Rta_04430 Rta_04850 Rta_04850 Rta_05320 Rta_05320 Rta_05460 Rta_05460 dnaN dnaN Rta_00070 Rta_00070 Rta_00110 Rta_00110 Rta_00180 Rta_00180 Rta_00440 Rta_00440 Rta_00500 Rta_00500 vapC vapC Rta_00900 Rta_00900 Rta_00910 Rta_00910 Rta_01040 Rta_01040 Rta_01080 Rta_01080 Rta_01090 Rta_01090 Rta_01120 Rta_01120 Rta_01520 Rta_01520 Rta_01680 Rta_01680 Rta_02000 Rta_02000 uvrA1 uvrA1 leuS leuS Rta_38230 Rta_38230 Rta_37860 Rta_37860 Rta_37390 Rta_37390 Rta_37380 Rta_37380 Rta_37360 Rta_37360 glnE glnE Rta_36950 Rta_36950 vapC-6 vapC-6 Rta_36720 Rta_36720 Rta_36660 Rta_36660 Rta_36640 Rta_36640 otsB otsB pgp pgp Rta_35990 Rta_35990 gph-2 gph-2 Rta_35070 Rta_35070 cas2 cas2 cas1 cas1 Rta_34730 Rta_34730 Rta_34700 Rta_34700 paaI paaI Rta_34270 Rta_34270 Rta_34100 Rta_34100 vapC-5 vapC-5 Rta_33390 Rta_33390 pth pth Rta_32960 Rta_32960 Rta_32940 Rta_32940 rph rph Rta_32470 Rta_32470 Rta_32420 Rta_32420 recJ recJ Rta_31970 Rta_31970 ileS ileS Rta_31760 Rta_31760 valS valS Rta_31310 Rta_31310 Rta_31100 Rta_31100 Rta_30970 Rta_30970 Rta_30335 Rta_30335 Rta_30220 Rta_30220 Rta_30210 Rta_30210 Rta_29420 Rta_29420 proS proS rne rne Rta_28620 Rta_28620 rnc rnc Rta_26890 Rta_26890 suhB suhB Rta_26230 Rta_26230 Rta_25576 Rta_25576 Rta_25340 Rta_25340 Rta_25330 Rta_25330 Rta_25310 Rta_25310 Rta_25100 Rta_25100 uvrC uvrC surE surE vapC-4 vapC-4 Rta_23610 Rta_23610 Rta_23570 Rta_23570 Rta_23475 Rta_23475 addB addB addA addA gloB gloB rnhA rnhA Rta_23180 Rta_23180 xseA xseA Rta_21390 Rta_21390 Rta_21360 Rta_21360 rng rng xthB xthB Rta_20570 Rta_20570 Rta_20540 Rta_20540 glnD glnD Rta_20000 Rta_20000 Rta_19880 Rta_19880 Rta_19810 Rta_19810 Rta_19720 Rta_19720 Rta_19160 Rta_19160 Rta_18840 Rta_18840 dnaQ dnaQ uvrB uvrB vapC-3 vapC-3 Rta_17730 Rta_17730 rnhB rnhB rnr rnr Rta_17240 Rta_17240 phoD phoD Rta_17020 Rta_17020 Rta_16930 Rta_16930 Rta_16850 Rta_16850 Rta_15680 Rta_15680 Rta_15630 Rta_15630 Rta_15580 Rta_15580 Rta_15300 Rta_15300 Rta_15290 Rta_15290 Rta_15170 Rta_15170 dnaE1 dnaE1 Rta_14920 Rta_14920 dnaE2 dnaE2 xthA xthA Rta_13840 Rta_13840 gph gph Rta_13290 Rta_13290 xseB xseB Rta_12960 Rta_12960 polA polA hsdR hsdR Rta_12300 Rta_12300 orn orn Rta_11880 Rta_11880 Rta_11570 Rta_11570 Rta_11450 Rta_11450 Rta_11400 Rta_11400 Rta_11360 Rta_11360 Rta_10460 Rta_10460 fbp fbp Rta_09960 Rta_09960 Rta_09900 Rta_09900 Rta_09890 Rta_09890 vapC-2 vapC-2 ruvC ruvC Rta_09470 Rta_09470 Rta_09420 Rta_09420 Rta_09300 Rta_09300 Rta_09270 Rta_09270 Rta_09160 Rta_09160 Rta_08870 Rta_08870 Rta_08040 Rta_08040 Rta_07780 Rta_07780 cca cca ybeY ybeY dtd dtd Rta_05610 Rta_05610 Rta_05630 Rta_05630 aceK aceK Rta_05710 Rta_05710 Rta_06460 Rta_06460 Rta_06680 Rta_06680 uvrA2 uvrA2 Rta_06790 Rta_06790 Rta_06820 Rta_06820 Rta_06900 Rta_06900
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rta_02850Conserved hypothetical protein. (140 aa)
Rta_03740Candidate membrane protein. (316 aa)
xthCCandidate exodeoxyribonuclease III. (263 aa)
Rta_04060Phospholipase A1; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family. (420 aa)
Rta_04400Protein-glutamate methylesterase (protein methylesterase)-like protein. (325 aa)
Rta_05570Histidinol phosphatase-like protein. (185 aa)
Rta_04430Esterase (lipase)-like protein. (245 aa)
Rta_04850Conserved hypothetical protein. (177 aa)
Rta_05320Phosphoglycerate mutase-like protein. (223 aa)
Rta_05460Lipase-like protein. (304 aa)
dnaNCandidate DNA polymerase III sliding clamp subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required [...] (368 aa)
Rta_00070Hypothetical protein. (55 aa)
Rta_00110Exonuclease protein-like protein. (204 aa)
Rta_00180Conserved Hypothetical protein. (113 aa)
Rta_00440Conserved hypothetical protein; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family. (190 aa)
Rta_00500Conserved hypothetical protein. (167 aa)
vapCHypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (139 aa)
Rta_00900Conserved hypothetical protein. (216 aa)
Rta_00910Conserved hypothetical protein. (142 aa)
Rta_01040Esterase, Carbohydrate Esterase Family 1-like protein; Serine hydrolase involved in the detoxification of formaldehyde. (289 aa)
Rta_01080Esterase, Carbohydrate Esterase Family 1-like protein. (78 aa)
Rta_01090Esterase, Carbohydrate Esterase Family 1-like protein. (85 aa)
Rta_01120Conserved hypothetical protein. (293 aa)
Rta_01520Conserved hypothetical protein. (329 aa)
Rta_01680Hypothetical protein. (124 aa)
Rta_02000Conserved hypothetical protein. (389 aa)
uvrA1Candidate excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (989 aa)
leuSCandidate Leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. (891 aa)
Rta_38230Ribonuclease P protein component (RNaseP protein)-like protein; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme. (134 aa)
Rta_37860Candidate guanyl-specific ribonuclease precursor (RNase). (131 aa)
Rta_37390Protein kinase (serine/threonine-protein kinase)-like protein. (901 aa)
Rta_37380Protein phosphatase (Phosphoprotein phosphatase)-like protein. (261 aa)
Rta_373603',5'-cyclic-nucleotide phosphodiesterase (Cyclic AMP phosphodiesterase)-like protein. (263 aa)
glnEBifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory regi [...] (930 aa)
Rta_36950Conserved hypothetical protein. (814 aa)
vapC-6Conserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (131 aa)
Rta_36720Esterase-like protein. (317 aa)
Rta_36660Conserved hypothetical protein. (151 aa)
Rta_36640Conserved hypothetical protein. (212 aa)
otsBCandidate trehalose 6-phosphate phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose. (249 aa)
pgpCandidate Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG). (179 aa)
Rta_35990Nuclease-like protein. (173 aa)
gph-2Candidate phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family. (237 aa)
Rta_35070Conserved hypothetical protein. (298 aa)
cas2CRISPR-associated protein Cas2-like protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (96 aa)
cas1CRISPR-associated protein Cas1-like protein; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette. (346 aa)
Rta_34730Conserved hypothetical protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family. (209 aa)
Rta_34700Conserved hypothetical protein. (224 aa)
paaICandidate phenylacetic acid degradation protein. (145 aa)
Rta_34270Conserved hypothetical protein. (168 aa)
Rta_34100Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family. (136 aa)
vapC-5Plasmid stability protein-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (135 aa)
Rta_33390Conserved hypothetical protein. (444 aa)
pthCandidate peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. (203 aa)
Rta_32960Conserved hypothetical protein. (307 aa)
Rta_32940Serine/threonine protein phosphatase-like protein. (300 aa)
rphtRNA nucleotidyltransferase; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (226 aa)
Rta_32470Candidate 4-hydroxybenzoyl-CoA thioesterase. (137 aa)
Rta_32420Conserved hypothetical protein. (381 aa)
recJCandidate single-stranded DNA-specific exonuclease. (573 aa)
Rta_31970Deoxyribonuclease protein-like protein. (274 aa)
ileSCandidate isoleucyl-tRNA synthetase (Isoleucine--tRNA ligase); Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 sub [...] (956 aa)
Rta_31760Conserved hypothetical protein. (457 aa)
valSCandidate valyl-tRNA synthetase (Valine--tRNA ligase); Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily. (964 aa)
Rta_31310Glycerophosphodiester phosphodiesterase (Glycerophosphoryl diester phosphodiesterase)-like protein. (253 aa)
Rta_31100Conserved hypothetical protein. (344 aa)
Rta_30970Arylsulfatase precursor-like protein. (439 aa)
Rta_30335Conserved hypothetical protein. (214 aa)
Rta_30220tRNA 3 endonuclease. (245 aa)
Rta_30210Ribonuclease Z (tRNA 3 endonuclease)-like protein. (244 aa)
Rta_29420Esterase, Carbohydrate Esterase Family 1-like protein. (319 aa)
proSGlobal RNA synthesis factor; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involve [...] (581 aa)
rneCandidate ribonuclease E (RNase E); Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily. (1015 aa)
Rta_28620Phosphoglycolate phosphatase-like protein. (219 aa)
rncCandidate ribonuclease III (RNase III); Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism. (230 aa)
Rta_26890Conserved hypothetical protein. (258 aa)
suhBCandidate inositol-1-monophosphatase (Inositol-1- phosphatase). (300 aa)
Rta_26230Conserved hypothetical protein. (303 aa)
Rta_25576Conserved hypothetical protein. (104 aa)
Rta_25340Conserved hypothetical protein. (162 aa)
Rta_25330Hypothetical protein. (101 aa)
Rta_25310Conserved hypothetical protein. (135 aa)
Rta_25100Candidate membrane protein. (190 aa)
uvrCCandidate excinuclease ABC, nuclease subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (679 aa)
surECandidate acid phosphatase (Stationary-phase survival protein); Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family. (260 aa)
vapC-4Plasmid stability protein stbB-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (141 aa)
Rta_23610Phosphohistidine phosphatase sixA-like protein. (153 aa)
Rta_23570Arsenate reductase (Arsenical pump modifier)-like protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (169 aa)
Rta_23475Candidate histidine kinase, classic. (450 aa)
addBCandidate ATP-dependent nuclease subunit B. (843 aa)
addACandidate ATP-dependent nuclease subunit A. (1085 aa)
gloBCandidate hydroxyacylglutathione hydrolase (Glyoxalase II); Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid. (281 aa)
rnhACandidate ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (148 aa)
Rta_23180Conserved hypothetical protein. (164 aa)
xseACandidate exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (422 aa)
Rta_21390Conserved hypothetical protein. (335 aa)
Rta_21360Type I site-specific deoxyribonuclease-like protein. (1048 aa)
rngCytoplasmic axial filament protein. (493 aa)
xthBCandidate exodeoxyribonuclease III. (271 aa)
Rta_20570Hypothetical protein. (118 aa)
Rta_20540PHA-depolymerases-like protein. (404 aa)
glnDUridylyl removing enzyme; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism. (882 aa)
Rta_20000Conserved hypothetical protein. (146 aa)
Rta_19880Triacylglycerol lipase (Lipase)-like protein; (Triglyceride lipase) (Tributyrase). (316 aa)
Rta_19810Deoxyribonuclease-like protein. (268 aa)
Rta_19720Conserved hypothetical protein. (149 aa)
Rta_19160Lysophospholipase (Lecithinase B)-like protein; (Lysolecithinase) (Phospholipase B). (209 aa)
Rta_18840Conserved hypothetical protein. (257 aa)
dnaQCandidate DNA polymerase III epsilon subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease. (243 aa)
uvrBCandidate excinuclease ABC, helicase subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA su [...] (701 aa)
vapC-3Conserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (145 aa)
Rta_17730Gluconolactonase precursor-like protein. (302 aa)
rnhBCandidate ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (196 aa)
rnrCandidate exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. (750 aa)
Rta_17240Candidate phosphoserine phosphatase (O-phosphoserine phosphohydrolase). (236 aa)
phoDCandidate alkaline phosphatase D precursor. (530 aa)
Rta_17020Conserved hypothetical protein. (192 aa)
Rta_16930Conserved hypothetical protein. (183 aa)
Rta_16850Conserved hypothetical protein. (75 aa)
Rta_15680D-(-)-3-hydroxybutyrate oligomer hydrolase-like protein. (755 aa)
Rta_15630Candidate poly(3-hydroxybutyrate) depolymerase precursor (PHB depolymerase). (498 aa)
Rta_15580Glycerophosphoryl diester phosphodiesterase (Glycerophosphodiester phosphodiesterase)-like protein. (413 aa)
Rta_15300Type 4 fimbrial pilin-like protein. (171 aa)
Rta_15290Type 4 fimbrial pilin-like protein. (186 aa)
Rta_15170Conserved hypothetical protein. (127 aa)
dnaE1Candidate DNA polymerase III alpha subunit, DnaE subfamily. (1174 aa)
Rta_14920Conserved hypothetical protein; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family. (190 aa)
dnaE2Candidate DNA polymerase III alpha subunit, DnaE subfamily; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. (1113 aa)
xthACandidate exodeoxyribonuclease III. (259 aa)
Rta_13840Candidate sulfur oxidation protein; Belongs to the 5'-nucleotidase family. (580 aa)
gphCandidate phosphoglycolate phosphatase. (217 aa)
Rta_13290Hypothetical protein. (198 aa)
xseBCandidate exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (75 aa)
Rta_12960Conserved hypothetical protein. (239 aa)
polACandidate DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (954 aa)
hsdRCandidate type I site-specific restriction-modification system, R subunit. (816 aa)
Rta_12300Conserved hypothetical protein. (165 aa)
ornCandidate oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family. (195 aa)
Rta_11880Hypothetical protein. (194 aa)
Rta_11570Conserved hypothetical protein. (722 aa)
Rta_11450Hypothetical protein. (242 aa)
Rta_11400Conserved hypothetical protein. (184 aa)
Rta_11360Conserved hypothetical protein. (153 aa)
Rta_10460Conserved hypothetical protein; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily. (163 aa)
fbpD-fructose-1,6-bisphosphate 1-phosphohydrolase. (338 aa)
Rta_09960Conserved hypothetical protein. (197 aa)
Rta_09900Conserved hypothetical protein. (170 aa)
Rta_09890Exoribonuclease R-like protein. (682 aa)
vapC-2Conserved hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family. (137 aa)
ruvCCandidate Holliday junction resolvasome, endonuclease subunit; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (182 aa)
Rta_09470Conserved hypothetical protein. (508 aa)
Rta_09420Conserved hypothetical protein. (255 aa)
Rta_09300Acyl-CoA thioester hydrolase-like protein. (136 aa)
Rta_09270Conserved hypothetical protein. (161 aa)
Rta_09160Hypothetical protein. (576 aa)
Rta_08870Conserved hypothetical protein. (126 aa)
Rta_08040Candidate deoxyguanosinetriphosphate triphosphohydrolase (dGTPase); Belongs to the dGTPase family. Type 2 subfamily. (383 aa)
Rta_07780ATP-dependent DNA ligase-like protein. (819 aa)
ccaCandidate tRNA nucleotidyltransferase (tRNA adenylyltransferase); Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases. (409 aa)
ybeYConserved hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. (133 aa)
dtdCandidate D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the [...] (146 aa)
Rta_05610Conserved hypothetical protein. (380 aa)
Rta_05630Conserved hypothetical protein. (128 aa)
aceKCandidate [Isocitrate dehydrogenase (NADP(+))] kinase (Isocitrate dehydrogenase kinase/phosphatase); Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation. (596 aa)
Rta_05710Conserved hypothetical protein. (132 aa)
Rta_06460Esterase/lipase-like protein. (353 aa)
Rta_06680Conserved hypothetical protein. (169 aa)
uvrA2Candidate excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (1915 aa)
Rta_06790Conserved hypothetical protein. (265 aa)
Rta_06820Eukaryotic-type DNA primase-like protein. (410 aa)
Rta_06900Conserved hypothetical protein. (132 aa)
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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