Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rta_11070 | Rta_32050 | Rta_11070 | Rta_32050 | Candidate ABC transporter, ATP-binding component. | Candidate ABC transporter, permease component. | 0.772 |
| Rta_11070 | lolA | Rta_11070 | Rta_31640 | Candidate ABC transporter, ATP-binding component. | Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.682 |
| Rta_26090 | Rta_32050 | Rta_26090 | Rta_32050 | Candidate ABC type antimicrobial peptide transport system, ATP-binding component. | Candidate ABC transporter, permease component. | 0.772 |
| Rta_26090 | lolA | Rta_26090 | Rta_31640 | Candidate ABC type antimicrobial peptide transport system, ATP-binding component. | Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.682 |
| Rta_32050 | Rta_11070 | Rta_32050 | Rta_11070 | Candidate ABC transporter, permease component. | Candidate ABC transporter, ATP-binding component. | 0.772 |
| Rta_32050 | Rta_26090 | Rta_32050 | Rta_26090 | Candidate ABC transporter, permease component. | Candidate ABC type antimicrobial peptide transport system, ATP-binding component. | 0.772 |
| Rta_32050 | lolA | Rta_32050 | Rta_31640 | Candidate ABC transporter, permease component. | Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.933 |
| Rta_32050 | lolD | Rta_32050 | Rta_32040 | Candidate ABC transporter, permease component. | Candidate ABC transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.994 |
| lolA | Rta_11070 | Rta_31640 | Rta_11070 | Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Candidate ABC transporter, ATP-binding component. | 0.682 |
| lolA | Rta_26090 | Rta_31640 | Rta_26090 | Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Candidate ABC type antimicrobial peptide transport system, ATP-binding component. | 0.682 |
| lolA | Rta_32050 | Rta_31640 | Rta_32050 | Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Candidate ABC transporter, permease component. | 0.933 |
| lolA | lolB | Rta_31640 | Rta_33260 | Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Candidate Outer-membrane lipoprotein lolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | 0.402 |
| lolA | lolD | Rta_31640 | Rta_32040 | Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | Candidate ABC transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | 0.704 |
| lolB | lolA | Rta_33260 | Rta_31640 | Candidate Outer-membrane lipoprotein lolB precursor; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein. | Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.402 |
| lolD | Rta_32050 | Rta_32040 | Rta_32050 | Candidate ABC transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Candidate ABC transporter, permease component. | 0.994 |
| lolD | lolA | Rta_32040 | Rta_31640 | Candidate ABC transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. | Candidate Outer-membrane lipoproteins carrier protein precursor; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.704 |