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Rta_12320 Rta_12320 Rta_37340 Rta_37340 gspG gspG Rta_12575 Rta_12575 gspH gspH gspJ gspJ Rta_15290 Rta_15290 Rta_12300 Rta_12300 Rta_15240 Rta_15240 gspG-2 gspG-2 pilA pilA gspH-2 gspH-2 Rta_15260 Rta_15260 gspI gspI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rta_12320Hypothetical protein. (406 aa)
Rta_37340Type 4 fimbrial precursor PilA-like protein; Belongs to the N-Me-Phe pilin family. (169 aa)
gspGCandidate pseudopilin, general secretion pathway protein G precursor. (150 aa)
Rta_12575Pseudopilin, general secretion pathway protein G precursor-like protein. (164 aa)
gspHCandidate pseudopilin, general secretion pathway protein H precursor. (114 aa)
gspJCandidate pseudopilin, general secretion pathway protein J precursor (PilD-dependent protein), component of type II secretion system. (244 aa)
Rta_15290Type 4 fimbrial pilin-like protein. (186 aa)
Rta_12300Conserved hypothetical protein. (165 aa)
Rta_15240Type 4 fimbrial biogenesis protein PilE-like protein. (130 aa)
gspG-2Candidate pseudopilin, general secretion pathway protein G precursor (PilD-dependent protein), component of type II secretion system. (146 aa)
pilACandidate type 4 fimbrial pilin protein. (147 aa)
gspH-2Candidate pseudopilin, general secretion pathway protein H precursor (PilD-dependent protein), component of type II secretion system. (150 aa)
Rta_15260Type 4 fimbrial biogenesis protein PilW-like protein. (370 aa)
gspICandidate pseudopilin, general secretion pathway protein I precursor (PilD-dependent protein), component of type II secretion system. (121 aa)
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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