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Rta_33320 Rta_33320 gclF gclF Rta_16240 Rta_16240 Rta_18315 Rta_18315 Rta_22650 Rta_22650 sdhB sdhB queG queG nuoI nuoI sdhB-2 sdhB-2 fdhB fdhB Rta_30560 Rta_30560 Rta_30590 Rta_30590 Rta_31260 Rta_31260
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rta_33320Ferredoxin-like protein. (100 aa)
gclFCandidate Glycolate oxidase iron-sulfur subunit. (409 aa)
Rta_16240Oxidoreductases-like protein. (1030 aa)
Rta_18315Conserved hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. (218 aa)
Rta_22650Candidate ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (109 aa)
sdhBCandidate succinate dehydrogenase iron-sulfur protein. (234 aa)
queGConserved hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family. (351 aa)
nuoICandidate NADH:ubiquinone oxidoreductase subunit 9 or 23 kDa subunit, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (172 aa)
sdhB-2Candidate succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (234 aa)
fdhBCandidate formate dehydrogenase iron-sulfur subunit. (205 aa)
Rta_30560Conserved hypothetical protein. (679 aa)
Rta_30590Formate dehydrogenase (Formate-hydrogen-lyase-linked, selenocysteine-containing polypeptide)-like protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (944 aa)
Rta_31260Alkylglycerone-phosphate synthase (Alkyldihydroxyacetonephosphate synthase)-like protein. (1303 aa)
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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