STRINGSTRING
ugpE ugpE Rta_31280 Rta_31280 Rta_30010 Rta_30010 Rta_30000 Rta_30000 Rta_27220 Rta_27220 Rta_35250 Rta_35250 Rta_27210 Rta_27210 Rta_26580 Rta_26580 Rta_23520 Rta_23520 Rta_23510 Rta_23510 Rta_22730 Rta_22730 Rta_22530 Rta_22530 Rta_20500 Rta_20500 Rta_20490 Rta_20490 Rta_19540 Rta_19540 Rta_19530 Rta_19530 dppC dppC Rta_34040 Rta_34040 Rta_33550 Rta_33550 Rta_33540 Rta_33540 Rta_33340 Rta_33340 Rta_33330 Rta_33330 Rta_32710 Rta_32710 Rta_04500 Rta_04500 Rta_04510 Rta_04510 Rta_05180 Rta_05180 Rta_05190 Rta_05190 Rta_09380 Rta_09380 Rta_09390 Rta_09390 Rta_13310 Rta_13310 Rta_15870 Rta_15870
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ugpECandidate ABC type sugar transport system, permease component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (284 aa)
Rta_31280Candidate ABC type sugar transport system, permease component. (294 aa)
Rta_30010Candidate ABC type sugar transport system, permease component. (321 aa)
Rta_30000Candidate ABC type sugar transport system, permease component. (267 aa)
Rta_27220Candidate ABC type nitrate/sulfonate/bicarbonate transport system, permease component. (259 aa)
Rta_35250Candidate ABC type dipeptide/oligopeptide transport system, permease component. (326 aa)
Rta_27210Candidate ABC type nitrate/sulfonate/bicarbonate transport system, permease component. (259 aa)
Rta_26580Candidate ABC transporter probably involved in nitrate transport, permease component. (252 aa)
Rta_23520Candidate ABC type phosphate transport system, permease component; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (312 aa)
Rta_23510Candidate ABC type phosphate transport system, permease component. (299 aa)
Rta_22730Candidate ABC type nitrate/sulfonate/bicarbonate transport system, permease component. (252 aa)
Rta_22530Candidate ABC type phosphonate transport systems, permease component. (268 aa)
Rta_20500Candidate ABC type sulfate transport systems, permease component; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (293 aa)
Rta_20490Candidate ABC type sulfate transport systems, permease component. (297 aa)
Rta_19540Candidate ABC type oligopeptide transport system, permease component. (351 aa)
Rta_19530Candidate ABC type oligopeptide transport system, permease component. (340 aa)
dppCCandidate ABC type dipeptide/oligopeptide transport system, permease component. (303 aa)
Rta_34040Candidate ABC type Fe3+ transport system, permease component with duplicated domains. (549 aa)
Rta_33550Candidate ABC type phosphate/phosphonate transport systems, permease component. (259 aa)
Rta_33540Candidate ABC type phosphate/phosphonate transport systems, permease component. (277 aa)
Rta_33340Candidate ABC type dipeptide/oligopeptide transport system, permease component. (292 aa)
Rta_33330Candidate ABC type dipeptide/oligopeptide transport system, permease component. (316 aa)
Rta_32710Candidate ABC type nitrate/sulfonate/bicarbonate transport system, permease component. (258 aa)
Rta_04500Glycerol transport system permease protein; Candidate ABC transporter probably involved in sn-glycerol-3-phosphate transport, permease component. (270 aa)
Rta_04510Glycerol transport system permease protein; Candidate ABC transporter probably involved in sn-glycerol-3-phosphate transport, permease component. (297 aa)
Rta_05180Candidate ABC type amino acid transport system, permease component. (223 aa)
Rta_05190Candidate ABC type amino acid transport system, permease component. (217 aa)
Rta_09380Candidate ABC type amino acid transport system, permease component. (239 aa)
Rta_09390Candidate ABC type amino acid transport system, permease component. (222 aa)
Rta_13310Candidate ABC type molybdate transport system, permease component; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (227 aa)
Rta_15870Candidate ABC type Fe3+ transport system, permease component with duplicated domains. (572 aa)
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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