STRINGSTRING
Rta_18430 Rta_18430 Rta_00930 Rta_00930 dadA dadA Rta_02680 Rta_02680 Rta_03800 Rta_03800 Rta_10840 Rta_10840 Rta_13470 Rta_13470 Rta_15720 Rta_15720 Rta_16140 Rta_16140 Rta_17940 Rta_17940 Rta_18590 Rta_18590 Rta_18810 Rta_18810 Rta_26670 Rta_26670 sdhA sdhA nadB nadB Rta_35500 Rta_35500
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rta_18430Succinate dehydrogenase, flavoprotein subunit (Fumarate reductase)-like protein. (426 aa)
Rta_00930Thioredoxin-disulfide reductase-like protein. (295 aa)
dadACandidate D-amino acid dehydrogenase small subunit. (447 aa)
Rta_02680Dehydrogenase (flavoproteins)-like protein. (454 aa)
Rta_03800Carotene 7,8-desaturase (zeta-carotene desaturase)-like protein. (482 aa)
Rta_10840Oxidoreductases-like protein. (561 aa)
Rta_13470Bifunctional protein : sensor, cNMP-binding domain-like protein. (559 aa)
Rta_15720Conserved hypothetical protein. (424 aa)
Rta_16140Conserved hypothetical protein. (500 aa)
Rta_17940Conserved hypothetical protein. (449 aa)
Rta_18590Oxidoreductases-like protein. (372 aa)
Rta_18810Dihydrolipoamide dehydrogenase. (476 aa)
Rta_26670Conserved hypothetical protein. (405 aa)
sdhACandidate succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (602 aa)
nadBCandidate L-aspartate oxidase (Quinolinate synthetase B); Catalyzes the oxidation of L-aspartate to iminoaspartate. (529 aa)
Rta_35500Fumarate reductase flavoprotein subunit precursor (Iron(III)-induced flavocytochrome C3)-like protein. (441 aa)
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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