STRINGSTRING
Rta_02130 Rta_02130 fabB fabB Rta_02640 Rta_02640 Rta_04120 Rta_04120 Rta_04180 Rta_04180 Rta_04930 Rta_04930 Rta_05450 Rta_05450 accB accB accC accC Rta_14330 Rta_14330 accA accA Rta_17220 Rta_17220 fabZ fabZ fabI fabI Rta_22710 Rta_22710 Rta_23110 Rta_23110 accD accD fabF fabF fabG fabG fabD fabD fabH fabH Rta_31880 Rta_31880 Rta_34930 Rta_34930
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rta_02130long-chain-fatty-acid--CoA ligase-like protein. (558 aa)
fabBCandidate 3-oxoacyl-[acyl-carrier-protein] synthase I (Beta-ketoacyl-ACP synthase); Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (414 aa)
Rta_026403-oxoacyl-[acyl-carrier-protein] reductase-like protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (246 aa)
Rta_04120Candidate 3-oxoacyl-[acyl-carrier-protein] synthase (Beta-ketoacyl-ACP synthase). (648 aa)
Rta_041804-coumarate--CoA ligase (4-coumaroyl-CoA synthase)-like protein. (518 aa)
Rta_049303-oxoacyl-[acyl-carrier-protein] reductase-like protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (247 aa)
Rta_05450long-chain-fatty-acid--CoA ligase-like protein. (561 aa)
accBCandidate Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (148 aa)
accCCandidate Biotin carboxylase (subunit of acetyl-CoA carboxylase); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa)
Rta_143303-oxoacyl-[acyl-carrier protein] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein. (248 aa)
accACandidate Acetyl-CoA carboxylase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (325 aa)
Rta_172203-oxoacyl-[acyl-carrier protein] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein. (159 aa)
fabZ3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases-like protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (156 aa)
fabICandidate Enoyl-[acyl-carrier-protein] reductase (NADH). (277 aa)
Rta_227103-oxoacyl-[acyl-carrier-protein] reductase-like protein; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases). (260 aa)
Rta_231103-oxoacyl-[acyl-carrier protein] reductase; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)-like protein. (253 aa)
accDCandidate Acetyl-CoA carboxylase carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (290 aa)
fabFCandidate 3-oxoacyl-[acyl-carrier-protein] synthase (Beta-ketoacyl-ACP synthase); Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (414 aa)
fabGCandidate 3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)
fabDCandidate [Acyl-carrier-protein] S-malonyltransferase. (301 aa)
fabHCandidate 3-oxoacyl-[acyl-carrier-protein] synthase (Beta-ketoacyl-ACP synthase); Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like sup [...] (325 aa)
Rta_31880Dehydrogenase/reductase-like protein. (263 aa)
Rta_34930long-chain-fatty-acid--CoA ligase-like protein. (648 aa)
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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