Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Rta_05680 | Rta_18100 | Rta_05680 | Rta_18100 | Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.907 |
| Rta_05680 | Rta_20040 | Rta_05680 | Rta_20040 | Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.916 |
| Rta_13090 | Rta_29130 | Rta_13090 | Rta_29130 | Geranyltranstransferase (Farnesyl-diphosphate synthase)-like protein; (Farnesyl pyrophosphate synthetase) (Farnesyl diphosphate synthetase) (FPP synthetase); Belongs to the FPP/GGPP synthase family. | Trans-hexaprenyltranstransferase (All-trans-heptaprenyl-diphosphate synthase)-like protein; (Heptaprenyl diphosphate synthase) (Heptaprenyl pyrophosphate synthetase); Belongs to the FPP/GGPP synthase family. | 0.924 |
| Rta_13090 | dxs | Rta_13090 | Rta_13100 | Geranyltranstransferase (Farnesyl-diphosphate synthase)-like protein; (Farnesyl pyrophosphate synthetase) (Farnesyl diphosphate synthetase) (FPP synthetase); Belongs to the FPP/GGPP synthase family. | 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating); Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.884 |
| Rta_13090 | ispE | Rta_13090 | Rta_33270 | Geranyltranstransferase (Farnesyl-diphosphate synthase)-like protein; (Farnesyl pyrophosphate synthetase) (Farnesyl diphosphate synthetase) (FPP synthetase); Belongs to the FPP/GGPP synthase family. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.444 |
| Rta_13090 | ispH | Rta_13090 | Rta_30310 | Geranyltranstransferase (Farnesyl-diphosphate synthase)-like protein; (Farnesyl pyrophosphate synthetase) (Farnesyl diphosphate synthetase) (FPP synthetase); Belongs to the FPP/GGPP synthase family. | Candidate 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.930 |
| Rta_13090 | uppS | Rta_13090 | Rta_17470 | Geranyltranstransferase (Farnesyl-diphosphate synthase)-like protein; (Farnesyl pyrophosphate synthetase) (Farnesyl diphosphate synthetase) (FPP synthetase); Belongs to the FPP/GGPP synthase family. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.965 |
| Rta_18100 | Rta_05680 | Rta_18100 | Rta_05680 | Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.907 |
| Rta_18100 | Rta_20040 | Rta_18100 | Rta_20040 | Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.912 |
| Rta_20040 | Rta_05680 | Rta_20040 | Rta_05680 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.916 |
| Rta_20040 | Rta_18100 | Rta_20040 | Rta_18100 | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | Acetyl-CoA C-acetyltransferase-like protein; Belongs to the thiolase-like superfamily. Thiolase family. | 0.912 |
| Rta_29130 | Rta_13090 | Rta_29130 | Rta_13090 | Trans-hexaprenyltranstransferase (All-trans-heptaprenyl-diphosphate synthase)-like protein; (Heptaprenyl diphosphate synthase) (Heptaprenyl pyrophosphate synthetase); Belongs to the FPP/GGPP synthase family. | Geranyltranstransferase (Farnesyl-diphosphate synthase)-like protein; (Farnesyl pyrophosphate synthetase) (Farnesyl diphosphate synthetase) (FPP synthetase); Belongs to the FPP/GGPP synthase family. | 0.924 |
| Rta_29130 | uppS | Rta_29130 | Rta_17470 | Trans-hexaprenyltranstransferase (All-trans-heptaprenyl-diphosphate synthase)-like protein; (Heptaprenyl diphosphate synthase) (Heptaprenyl pyrophosphate synthetase); Belongs to the FPP/GGPP synthase family. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.959 |
| dxr | dxs | Rta_17490 | Rta_13100 | 1-deoxyxylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 1-deoxy-D-xylulose-5-phosphate pyruvate-lyase (carboxylating); Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily. | 0.983 |
| dxr | ispD | Rta_17490 | Rta_17260 | 1-deoxyxylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). | 0.982 |
| dxr | ispE | Rta_17490 | Rta_33270 | 1-deoxyxylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. | 0.834 |
| dxr | ispF | Rta_17490 | Rta_17270 | 1-deoxyxylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase-like protein; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). | 0.856 |
| dxr | ispG | Rta_17490 | Rta_18940 | 1-deoxyxylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin); Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family. | 0.780 |
| dxr | ispH | Rta_17490 | Rta_30310 | 1-deoxyxylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Candidate 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. | 0.833 |
| dxr | uppS | Rta_17490 | Rta_17470 | 1-deoxyxylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. | Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids. | 0.977 |
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