STRINGSTRING
Rta_02820 Rta_02820 Rta_03000 Rta_03000 Rta_03010 Rta_03010 Rta_03020 Rta_03020 Rta_04480 Rta_04480 Rta_04500 Rta_04500 Rta_04510 Rta_04510 Rta_04520 Rta_04520 Rta_04530 Rta_04530 Rta_06720 Rta_06720 Rta_07280 Rta_07280 Rta_07290 Rta_07290 Rta_07300 Rta_07300 Rta_07580 Rta_07580 Rta_07590 Rta_07590 Rta_07600 Rta_07600 Rta_07610 Rta_07610 Rta_08120 Rta_08120 Rta_08130 Rta_08130 Rta_08140 Rta_08140 Rta_08160 Rta_08160 Rta_08170 Rta_08170 Rta_08570 Rta_08570 Rta_08720 Rta_08720 Rta_08730 Rta_08730 Rta_09370 Rta_09370 Rta_09380 Rta_09380 Rta_09390 Rta_09390 Rta_09400 Rta_09400 Rta_10040 Rta_10040 Rta_10050 Rta_10050 Rta_10060 Rta_10060 Rta_10070 Rta_10070 Rta_10080 Rta_10080 Rta_12220 Rta_12220 Rta_12230 Rta_12230 Rta_12240 Rta_12240 Rta_12250 Rta_12250 Rta_12260 Rta_12260 Rta_13230 Rta_13230 Rta_13240 Rta_13240 Rta_13250 Rta_13250 modC modC Rta_13310 Rta_13310 Rta_13320 Rta_13320 Rta_14870 Rta_14870 Rta_15620 Rta_15620 Rta_15640 Rta_15640 livF livF Rta_15660 Rta_15660 Rta_15670 Rta_15670 Rta_15860 Rta_15860 Rta_15870 Rta_15870 afuC afuC Rta_17190 Rta_17190 Rta_17660 Rta_17660 Rta_17670 Rta_17670 pstS pstS Rta_17690 Rta_17690 livF-2 livF-2 Rta_18500 Rta_18500 Rta_18510 Rta_18510 Rta_18520 Rta_18520 Rta_18530 Rta_18530 Rta_19400 Rta_19400 Rta_19410 Rta_19410 Rta_19450 Rta_19450 Rta_19520 Rta_19520 Rta_19530 Rta_19530 Rta_19540 Rta_19540 Rta_19550 Rta_19550 livF-3 livF-3 Rta_20080 Rta_20080 Rta_20090 Rta_20090 Rta_20100 Rta_20100 Rta_20110 Rta_20110 cysA cysA Rta_20490 Rta_20490 Rta_20500 Rta_20500 Rta_20510 Rta_20510 msbA msbA Rta_21290 Rta_21290 Rta_21300 Rta_21300 Rta_21310 Rta_21310 Rta_21320 Rta_21320 Rta_22350 Rta_22350 Rta_22360 Rta_22360 Rta_22370 Rta_22370 Rta_22380 Rta_22380 Rta_22390 Rta_22390 Rta_22530 Rta_22530 Rta_22540 Rta_22540 phnC phnC Rta_22570 Rta_22570 Rta_22850 Rta_22850 pstB pstB Rta_23510 Rta_23510 Rta_23520 Rta_23520 Rta_23530 Rta_23530 Rta_24660 Rta_24660 Rta_24810 Rta_24810 Rta_26520 Rta_26520 Rta_26570 Rta_26570 Rta_26580 Rta_26580 Rta_26590 Rta_26590 Rta_27210 Rta_27210 Rta_27250 Rta_27250 Rta_27260 Rta_27260 Rta_27740 Rta_27740 Rta_29980 Rta_29980 Rta_30000 Rta_30000 Rta_30010 Rta_30010 Rta_30020 Rta_30020 Rta_31270 Rta_31270 Rta_31280 Rta_31280 ugpE ugpE Rta_31300 Rta_31300 Rta_31580 Rta_31580 Rta_31590 Rta_31590 Rta_31600 Rta_31600 Rta_31610 Rta_31610 lolD lolD Rta_32050 Rta_32050 Rta_32220 Rta_32220 Rta_32340 Rta_32340 Rta_32350 Rta_32350 Rta_32360 Rta_32360 Rta_32370 Rta_32370 Rta_32750 Rta_32750 Rta_32760 Rta_32760 Rta_32770 Rta_32770 Rta_32780 Rta_32780 Rta_32790 Rta_32790 Rta_33540 Rta_33540 Rta_33550 Rta_33550 phnC-2 phnC-2 Rta_33570 Rta_33570 Rta_34040 Rta_34040 Rta_34050 Rta_34050 Rta_34580 Rta_34580 Rta_34590 Rta_34590 nodI nodI Rta_34650 Rta_34650 Rta_34800 Rta_34800 Rta_34940 Rta_34940 Rta_34950 Rta_34950 Rta_34960 Rta_34960 Rta_34970 Rta_34970 Rta_34980 Rta_34980
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Rta_02820Candidate ATP-binding component of an ABC transporter, unknown function. (263 aa)
Rta_03000Candidate ABC transporter, permease component. (368 aa)
Rta_03010Candidate ABC transporter, ATP-binding component. (266 aa)
Rta_03020ABC transporter periplasmic component-like protein. (325 aa)
Rta_04480Glycerol transport system substrate-binding protein; Candidate ABC transporter probably involved in sn-glycerol-3-phosphate transport, periplasmic component. (576 aa)
Rta_04500Glycerol transport system permease protein; Candidate ABC transporter probably involved in sn-glycerol-3-phosphate transport, permease component. (270 aa)
Rta_04510Glycerol transport system permease protein; Candidate ABC transporter probably involved in sn-glycerol-3-phosphate transport, permease component. (297 aa)
Rta_04520Glycerol transport system ATP-binding protein; Candidate ABC transporter probably involved in sn-glycerol-3-phosphate transport, ATP-binding component; Belongs to the ABC transporter superfamily. (357 aa)
Rta_04530Glycerol transport system ATP-binding protein; Candidate ABC transporter probably involved in sn-glycerol-3-phosphate transport, ATP-binding component; Belongs to the ABC transporter superfamily. (357 aa)
Rta_06720Candidate ABC type branched chain amino acid transport system, periplasmic component. (370 aa)
Rta_07280Candidate Ribose/xylose/arabinose/galactoside ABC type transport system, ATP-binding component with duplicated domains. (495 aa)
Rta_07290Candidate Ribose/xylose/arabinose/galactoside ABC type transport system, permease component. (336 aa)
Rta_07300Candidate Ribose/xylose/arabinose/galactoside ABC type transport system, periplasmic component. (324 aa)
Rta_07580Candidate ABC type branched chain amino acid transport system, ATP-binding component. (266 aa)
Rta_07590Candidate ABC type branched chain amino acid transport system, ATP-binding component. (243 aa)
Rta_07600Candidate ABC type branched chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (304 aa)
Rta_07610Candidate ABC type branched chain amino acid transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (326 aa)
Rta_08120Candidate ABC transporter, permease component. (272 aa)
Rta_08130Candidate ABC transporter, ATP-binding component. (260 aa)
Rta_08140ABC transporter periplasmic component-like protein. (165 aa)
Rta_08160Conserved hypothetical protein. (213 aa)
Rta_08170Hypothetical protein. (101 aa)
Rta_08570Candidate ABC type branched chain amino acid transport systems, periplasmic component. (356 aa)
Rta_08720Transport permease protein; Candidate ABC type polysaccharide/polyol phosphate export systems that might be involved in cell envelope biogenesis, permease component. (235 aa)
Rta_08730Lipopolysaccharide transport system ATP-binding protein; Candidate ABC type polysaccharide/polyol phosphate export systems that might be involved in cell envelope biogenesis, ATP-binding component. (448 aa)
Rta_09370Candidate ABC type amino acid transport system, periplasmic component. (298 aa)
Rta_09380Candidate ABC type amino acid transport system, permease component. (239 aa)
Rta_09390Candidate ABC type amino acid transport system, permease component. (222 aa)
Rta_09400Candidate ABC type amino acid transport system, ATP-binding component. (245 aa)
Rta_10040Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (317 aa)
Rta_10050Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (294 aa)
Rta_10060Candidate ABC type branched chain amino acid transport systems, periplasmic component. (400 aa)
Rta_10070Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (234 aa)
Rta_10080Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (257 aa)
Rta_12220Candidate ABC type branched chain amino acid transport systems, periplasmic component. (387 aa)
Rta_12230Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (235 aa)
Rta_12240Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (254 aa)
Rta_12250Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (342 aa)
Rta_12260Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (318 aa)
Rta_13230Candidate ABC transporter probably involved in tungstate transport, permease component. (245 aa)
Rta_13240Candidate ABC transporter probably involved in tungstate transport, ATP-binding component; Belongs to the ABC transporter superfamily. (233 aa)
Rta_13250Candidate ABC transporter probably involved in tungstate transport, periplasmic component. (278 aa)
modCCandidate ABC type molybdate transport system, ATP-binding component; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (369 aa)
Rta_13310Candidate ABC type molybdate transport system, permease component; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (227 aa)
Rta_13320Candidate ABC type molybdate transport system, periplasmic component. (249 aa)
Rta_14870Candidate ABC type multidrug transport system, ATP-binding and permease components. (618 aa)
Rta_15620Candidate ABC type branched chain amino acid transport systems, periplasmic component. (397 aa)
Rta_15640Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (257 aa)
livFCandidate ABC type branched chain amino acid transport systems, ATP-binding component. (241 aa)
Rta_15660Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (326 aa)
Rta_15670Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (376 aa)
Rta_15860Candidate ABC type Fe3+ transport system, periplasmic component. (346 aa)
Rta_15870Candidate ABC type Fe3+ transport system, permease component with duplicated domains. (572 aa)
afuCCandidate ABC transporter, ATP-binding component probably involved in an Fe3+ transport system; Belongs to the ABC transporter superfamily. (354 aa)
Rta_17190Candidate ABC type branched chain amino acid transport systems, periplasmic component. (373 aa)
Rta_17660Candidate Ribose/xylose/arabinose/galactoside ABC type transport systems, permease component. (346 aa)
Rta_17670Candidate Ribose/xylose/arabinose/galactoside ABC type transport systems, permease component. (325 aa)
pstSCandidate Ribose/xylose/arabinose/galactoside ABC type transport systems, ATP-binding component with duplicated domains. (495 aa)
Rta_17690Candidate Ribose/xylose/arabinose/galactoside ABC type transport systems, periplasmic component. (321 aa)
livF-2Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (236 aa)
Rta_18500Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (253 aa)
Rta_18510Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (325 aa)
Rta_18520Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (290 aa)
Rta_18530Candidate ABC type branched chain amino acid transport systems, periplasmic component. (404 aa)
Rta_19400Candidate membrane protein. (366 aa)
Rta_19410Candidate permease. (378 aa)
Rta_19450Candidate ABC type branched chain amino acid transport systems, periplasmic component. (401 aa)
Rta_19520Candidate ABC type oligopeptide transport system, periplasmic component. (604 aa)
Rta_19530Candidate ABC type oligopeptide transport system, permease component. (340 aa)
Rta_19540Candidate ABC type oligopeptide transport system, permease component. (351 aa)
Rta_19550Candidate ABC type oligopeptide transport system, ATP-binding component with duplicated domains; Belongs to the ABC transporter superfamily. (541 aa)
livF-3Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (231 aa)
Rta_20080Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (259 aa)
Rta_20090Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (430 aa)
Rta_20100Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (344 aa)
Rta_20110Candidate ABC type branched chain amino acid transport systems, periplasmic component. (411 aa)
cysACandidate ABC type sulfate/molybdate transport systems, ATP-binding component; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system. (372 aa)
Rta_20490Candidate ABC type sulfate transport systems, permease component. (297 aa)
Rta_20500Candidate ABC type sulfate transport systems, permease component; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (293 aa)
Rta_20510Candidate ABC type sulfate transport systems, periplasmic component. (331 aa)
msbACandidate ABC type multidrug transport system, ATP-binding and permease components; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. (575 aa)
Rta_21290Candidate Uncharacterized ABC type transport system, periplasmic component. (334 aa)
Rta_21300Candidate Uncharacterized ABC type transport system, ATP-binding component with duplicated domains. (506 aa)
Rta_21310Candidate Uncharacterized ABC type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (353 aa)
Rta_21320Candidate Uncharacterized ABC type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (307 aa)
Rta_22350Candidate ABC type branched chain amino acid transport systems, periplasmic component. (395 aa)
Rta_22360Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (287 aa)
Rta_22370Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (332 aa)
Rta_22380Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (249 aa)
Rta_22390Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (239 aa)
Rta_22530Candidate ABC type phosphonate transport systems, permease component. (268 aa)
Rta_22540Candidate ABC type phosphonate transport systems, periplasmic component. (320 aa)
phnCCandidate ABC type phosphonate transport systems, ATP-binding component; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (286 aa)
Rta_22570Candidate ABC type sulfate transport systems, periplasmic component. (337 aa)
Rta_22850Hypothetical protein. (298 aa)
pstBCandidate ABC type phosphate transport system, ATP-binding component; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (259 aa)
Rta_23510Candidate ABC type phosphate transport system, permease component. (299 aa)
Rta_23520Candidate ABC type phosphate transport system, permease component; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (312 aa)
Rta_23530Candidate ABC type phosphate transport system, periplasmic component; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family. (345 aa)
Rta_24660Candidate ABC type Fe3+ transport system. (381 aa)
Rta_24810Periplasmic component of an ABC type molybdate transport system-like protein. (219 aa)
Rta_26520Candidate ABC type branched chain amino acid transport systems, periplasmic component. (428 aa)
Rta_26570Candidate ABC transporter probably involved in nitrate transport, periplasmic component. (428 aa)
Rta_26580Candidate ABC transporter probably involved in nitrate transport, permease component. (252 aa)
Rta_26590Candidate ABC transporter probably involved in nitrate transport, ATP-binding component. (271 aa)
Rta_27210Candidate ABC type nitrate/sulfonate/bicarbonate transport system, permease component. (259 aa)
Rta_27250Candidate ABC type nitrate/sulfonate/bicarbonate transport system, periplasmic component. (353 aa)
Rta_27260Candidate ABC type nitrate/sulfonate/bicarbonate transport system, periplasmic component. (350 aa)
Rta_27740Candidate ABC type bacteriocin/lantibiotic exporters, ATP-binding and permease domains. (629 aa)
Rta_29980Candidate ABC type sugar transport system, ATP-binding component; Belongs to the ABC transporter superfamily. (347 aa)
Rta_30000Candidate ABC type sugar transport system, permease component. (267 aa)
Rta_30010Candidate ABC type sugar transport system, permease component. (321 aa)
Rta_30020Candidate ABC type sugar transport system, periplasmic component. (393 aa)
Rta_31270Candidate ABC type sugar transport system, periplasmic component. (434 aa)
Rta_31280Candidate ABC type sugar transport system, permease component. (294 aa)
ugpECandidate ABC type sugar transport system, permease component; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane. (284 aa)
Rta_31300Candidate ABC type sugar transport system, ATP-binding component; Belongs to the ABC transporter superfamily. (336 aa)
Rta_31580Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (238 aa)
Rta_31590Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (267 aa)
Rta_31600Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (365 aa)
Rta_31610Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (309 aa)
lolDCandidate ABC transporter, ATP-binding component; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner. (226 aa)
Rta_32050Candidate ABC transporter, permease component. (418 aa)
Rta_32220Candidate Uncharacterized ABC type transport system, periplasmic component. (357 aa)
Rta_32340Candidate Uncharacterized ABC type transport system, periplasmic component. (392 aa)
Rta_32350Candidate Uncharacterized ABC type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (306 aa)
Rta_32360Candidate Uncharacterized ABC type transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. (356 aa)
Rta_32370Candidate Uncharacterized ABC type transport system, ATP-binding component with duplicated domains. (511 aa)
Rta_32750Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (234 aa)
Rta_32760Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (286 aa)
Rta_32770Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (356 aa)
Rta_32780Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (520 aa)
Rta_32790Candidate ABC type branched chain amino acid transport systems, periplasmic component. (427 aa)
Rta_33540Candidate ABC type phosphate/phosphonate transport systems, permease component. (277 aa)
Rta_33550Candidate ABC type phosphate/phosphonate transport systems, permease component. (259 aa)
phnC-2Candidate ABC type phosphate/phosphonate transport systems, ATP-binding component; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family. (278 aa)
Rta_33570Candidate ABC type phosphate/phosphonate transport systems, periplasmic component. (288 aa)
Rta_34040Candidate ABC type Fe3+ transport system, permease component with duplicated domains. (549 aa)
Rta_34050Candidate ABC transporter, ATP-binding component probably involved in an Fe3+ transport system; Belongs to the ABC transporter superfamily. (361 aa)
Rta_34580Hypothetical protein. (308 aa)
Rta_34590Candidate membrane protein. (250 aa)
nodICandidate ABC type multidrug transport system, ATP-binding component; Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modified beta-1,4- linked N-acetylglucosamine oligosaccharide. This subunit is responsible for energy coupling to the transport system. (313 aa)
Rta_34650Candidate ABC transporter, permease component probably involved in multidrug transport. (265 aa)
Rta_34800Periplasmic component of an ABC type molybdate transport system-like protein. (233 aa)
Rta_34940Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (280 aa)
Rta_34950Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (309 aa)
Rta_34960Candidate ABC type branched chain amino acid transport systems, permease component; Belongs to the binding-protein-dependent transport system permease family. (358 aa)
Rta_34970Candidate ABC type branched chain amino acid transport systems, periplasmic component. (440 aa)
Rta_34980Candidate ABC type branched chain amino acid transport systems, ATP-binding component. (271 aa)
Your Current Organism:
Ramlibacter tataouinensis
NCBI taxonomy Id: 365046
Other names: Acidivorax sp. TTB310, Acidovorax sp. TTB310, R. tataouinensis TTB310, Ramlibacter tataouinensis TTB310, Ramlibacter tataouinensis str. TTB310, Ramlibacter tataouinensis strain TTB310
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