STRINGSTRING
Csa_7G037630 Csa_7G037630 Csa_7G390040 Csa_7G390040 Csa_6G014650 Csa_6G014650 Csa_6G014700 Csa_6G014700 Csa_7G374590 Csa_7G374590 Csa_7G426580 Csa_7G426580 Csa_7G357030 Csa_7G357030 Csa_7G407540 Csa_7G407540 Csa_6G014610 Csa_6G014610 Csa_6G188660 Csa_6G188660 Csa_6G452070 Csa_6G452070 Csa_6G446430 Csa_6G446430 Csa_6G510870 Csa_6G510870 Csa_6G490020 Csa_6G490020 Csa_6G517270 Csa_6G517270 Csa_5G152930 Csa_5G152930 Csa_6G502590 Csa_6G502590 Csa_5G435050 Csa_5G435050 Csa_6G517340 Csa_6G517340 Csa_5G169080 Csa_5G169080 Csa_5G312340 Csa_5G312340 Csa_5G600940 Csa_5G600940 Csa_5G492360 Csa_5G492360 Csa_5G517200 Csa_5G517200 Csa_5G639490 Csa_5G639490 Csa_5G492870 Csa_5G492870 Csa_4G009360 Csa_4G009360 Csa_4G049080 Csa_4G049080 Csa_5G643990 Csa_5G643990 Csa_4G098200 Csa_4G098200 Csa_4G338430 Csa_4G338430 Csa_4G415910 Csa_4G415910 Csa_4G652030 Csa_4G652030 Csa_4G338420 Csa_4G338420 Csa_3G064190 Csa_3G064190 Csa_3G039340 Csa_3G039340 Csa_4G651950 Csa_4G651950 Csa_3G036500 Csa_3G036500 Csa_3G143540 Csa_3G143540 Csa_3G038160 Csa_3G038160 Csa_3G002510 Csa_3G002510 Csa_3G129690 Csa_3G129690 Csa_3G166240 Csa_3G166240 Csa_3G624050 Csa_3G624050 Csa_3G690810 Csa_3G690810 Csa_3G822200 Csa_3G822200 Csa_3G740170 Csa_3G740170 Csa_3G815480 Csa_3G815480 Csa_3G903480 Csa_3G903480 Csa_3G877600 Csa_3G877600 Csa_2G093850 Csa_2G093850 Csa_2G193330 Csa_2G193330 Csa_2G401990 Csa_2G401990 Csa_2G072450 Csa_2G072450 Csa_1G024870 Csa_1G024870 Csa_2G401490 Csa_2G401490 Csa_1G042170 Csa_1G042170 Csa_1G043180 Csa_1G043180 Csa_2G363560 Csa_2G363560 Csa_1G020880 Csa_1G020880 Csa_1G257890 Csa_1G257890 Csa_1G257900 Csa_1G257900 Csa_1G599390 Csa_1G599390
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Csa_7G037630TAF domain-containing protein. (544 aa)
Csa_7G390040Helicase ATP-binding domain-containing protein. (758 aa)
Csa_6G014650RPOL4c domain-containing protein. (138 aa)
Csa_6G014700DUF4101 domain-containing protein. (817 aa)
Csa_7G374590Uncharacterized protein. (207 aa)
Csa_7G426580RNA_pol_L_2 domain-containing protein. (162 aa)
Csa_7G357030Uncharacterized protein. (1899 aa)
Csa_7G407540Uncharacterized protein. (135 aa)
Csa_6G014610Uncharacterized protein. (369 aa)
Csa_6G188660Uncharacterized protein. (536 aa)
Csa_6G452070TFIID_20kDa domain-containing protein. (511 aa)
Csa_6G446430BTP domain-containing protein. (360 aa)
Csa_6G510870RPOL4c domain-containing protein. (220 aa)
Csa_6G490020CYCLIN domain-containing protein; Belongs to the cyclin family. (332 aa)
Csa_6G517270RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (451 aa)
Csa_5G152930Uncharacterized protein. (821 aa)
Csa_6G502590Uncharacterized protein. (443 aa)
Csa_5G435050DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1963 aa)
Csa_6G517340DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1248 aa)
Csa_5G169080General transcription factor IIH subunit. (423 aa)
Csa_5G312340Uncharacterized protein. (176 aa)
Csa_5G600940Uncharacterized protein. (71 aa)
Csa_5G492360TFIIF_beta domain-containing protein. (190 aa)
Csa_5G517200TAFII55_N domain-containing protein. (296 aa)
Csa_5G639490BTP domain-containing protein. (376 aa)
Csa_5G492870Uncharacterized protein. (97 aa)
Csa_4G009360RTR1-type domain-containing protein. (662 aa)
Csa_4G049080Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (277 aa)
Csa_5G643990RPOL4c domain-containing protein. (121 aa)
Csa_4G098200Uncharacterized protein. (303 aa)
Csa_4G338430Uncharacterized protein. (303 aa)
Csa_4G415910TFIIB-type domain-containing protein. (312 aa)
Csa_4G652030Uncharacterized protein. (674 aa)
Csa_4G338420BSD domain-containing protein. (388 aa)
Csa_3G064190TAF domain-containing protein. (535 aa)
Csa_3G039340DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1483 aa)
Csa_4G651950DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1197 aa)
Csa_3G036500Uncharacterized protein. (70 aa)
Csa_3G143540Uncharacterized protein. (190 aa)
Csa_3G038160TAFII28 domain-containing protein. (220 aa)
Csa_3G002510DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1867 aa)
Csa_3G129690Uncharacterized protein. (445 aa)
Csa_3G166240DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (114 aa)
Csa_3G624050Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (538 aa)
Csa_3G690810RNA_pol_L_2 domain-containing protein. (116 aa)
Csa_3G822200Uncharacterized protein. (227 aa)
Csa_3G740170BTP domain-containing protein. (370 aa)
Csa_3G815480Uncharacterized protein. (54 aa)
Csa_3G903480Uncharacterized protein. (895 aa)
Csa_3G877600Uncharacterized protein. (142 aa)
Csa_2G093850RPOLD domain-containing protein. (320 aa)
Csa_2G193330Uncharacterized protein. (175 aa)
Csa_2G401990Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (106 aa)
Csa_2G072450Uncharacterized protein. (295 aa)
Csa_1G024870Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (418 aa)
Csa_2G401490Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (106 aa)
Csa_1G042170Peptidase_M1 domain-containing protein. (1362 aa)
Csa_1G043180Uncharacterized protein. (51 aa)
Csa_2G363560Uncharacterized protein. (260 aa)
Csa_1G020880HTH TFE/IIEalpha-type domain-containing protein. (476 aa)
Csa_1G257890Uncharacterized protein. (894 aa)
Csa_1G257900MAT1 domain-containing protein. (189 aa)
Csa_1G599390Uncharacterized protein. (200 aa)
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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