STRINGSTRING
Csa_7G450520 Csa_7G450520 Csa_7G449470 Csa_7G449470 Csa_6G418910 Csa_6G418910 Csa_6G365120 Csa_6G365120 Csa_6G498930 Csa_6G498930 Csa_6G505900 Csa_6G505900 Csa_3G840410 Csa_3G840410 Csa_2G383360 Csa_2G383360 Csa_1G173200 Csa_1G173200 Csa_1G533390 Csa_1G533390
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Csa_7G450520TFIID_20kDa domain-containing protein. (680 aa)
Csa_7G449470Uncharacterized protein. (179 aa)
Csa_6G418910TAF domain-containing protein. (543 aa)
Csa_6G365120Transcription and mRNA export factor ENY2; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex [...] (111 aa)
Csa_6G498930BTP domain-containing protein. (612 aa)
Csa_6G505900Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (3889 aa)
Csa_3G840410SGF29 C-terminal domain-containing protein. (333 aa)
Csa_2G383360Transcription initiation factor TFIID subunit 10; TAFs are components of the transcription factor IID (TFIID) complex that is essential for mediating regulation of RNA polymerase transcription; Belongs to the TAF10 family. (136 aa)
Csa_1G173200Transcriptional adapter. (552 aa)
Csa_1G533390SAGA-associated factor 11. (178 aa)
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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