25 items (Cucumis sativus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Csa_3G126150	Uncharacterized protein. (434 aa)
	Csa_3G147740	Uncharacterized protein; Belongs to the heat shock protein 70 family. (571 aa)
	Csa_5G315380	LRAT domain-containing protein. (254 aa)
	Csa_4G179170	Heat shock protein; Belongs to the heat shock protein 70 family. (680 aa)
	Csa_3G732560	OTU domain-containing protein. (227 aa)
	Csa_3G781590	LRAT domain-containing protein. (264 aa)
	Csa_3G781610	LRAT domain-containing protein. (264 aa)
	Csa_3G817710	BZIP domain-containing protein. (768 aa)
	Csa_2G070310	Uncharacterized protein; Belongs to the heat shock protein 70 family. (650 aa)
	Csa_1G264000	PRKCSH domain-containing protein. (294 aa)
	Csa_1G575080	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (242 aa)
	Csa_4G011630	Stress associated endoplasmic reticulum protein. (68 aa)
	Csa_4G194270	UBA domain-containing protein. (397 aa)
	Csa_4G295440	Heat shock protein 70; Belongs to the heat shock protein 70 family. (647 aa)
	Csa_5G512930	Heat shock protein 70; Belongs to the heat shock protein 70 family. (652 aa)
	Csa_4G022960	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (285 aa)
	Csa_5G514500	Uncharacterized protein; Belongs to the heat shock protein 70 family. (648 aa)
	Csa_5G604400	Uncharacterized protein. (332 aa)
	Csa_5G165180	Uncharacterized protein. (281 aa)
	Csa_5G149330	Uncharacterized protein; Belongs to the heat shock protein 70 family. (665 aa)
	Csa_6G509680	Uncharacterized protein. (898 aa)
	Csa_6G514810	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family. (244 aa)
	Csa_6G486760	Uncharacterized protein. (942 aa)
	Csa_6G087710	Stress associated endoplasmic reticulum protein. (68 aa)
	Csa_7G209540	OTU domain-containing protein. (310 aa)

Your Current Organism:

Cucumis sativus

NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Csa_1G264000	Csa_1G575080	A0A0A0LWI4	A0A0A0LZA3	PRKCSH domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.949
Csa_1G264000	Csa_4G022960	A0A0A0LWI4	A0A0A0KU47	PRKCSH domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.949
Csa_1G264000	Csa_5G149330	A0A0A0LWI4	A0A0A0KKD9	PRKCSH domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.828
Csa_1G264000	Csa_6G514810	A0A0A0LWI4	A0A0A0KHD5	PRKCSH domain-containing protein.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.949
Csa_1G575080	Csa_1G264000	A0A0A0LZA3	A0A0A0LWI4	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	PRKCSH domain-containing protein.	0.949
Csa_1G575080	Csa_4G022960	A0A0A0LZA3	A0A0A0KU47	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.901
Csa_1G575080	Csa_4G194270	A0A0A0LZA3	A0A0A0KYQ9	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	UBA domain-containing protein.	0.547
Csa_1G575080	Csa_5G149330	A0A0A0LZA3	A0A0A0KKD9	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.856
Csa_1G575080	Csa_6G514810	A0A0A0LZA3	A0A0A0KHD5	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	0.907
Csa_2G070310	Csa_4G179170	A0A0A0LJF4	A0A0A0KZT6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Heat shock protein; Belongs to the heat shock protein 70 family.	0.415
Csa_2G070310	Csa_5G149330	A0A0A0LJF4	A0A0A0KKD9	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.711
Csa_3G147740	Csa_4G179170	A0A0A0LAC6	A0A0A0KZT6	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Heat shock protein; Belongs to the heat shock protein 70 family.	0.470
Csa_3G147740	Csa_5G149330	A0A0A0LAC6	A0A0A0KKD9	Uncharacterized protein; Belongs to the heat shock protein 70 family.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.737
Csa_3G732560	Csa_7G209540	A0A0A0LCX5	A0A0A0K3S3	OTU domain-containing protein.	OTU domain-containing protein.	0.560
Csa_3G781590	Csa_5G149330	A0A0A0LE62	A0A0A0KKD9	LRAT domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.706
Csa_3G781610	Csa_5G149330	A0A0A0LGT5	A0A0A0KKD9	LRAT domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.706
Csa_3G817710	Csa_5G149330	A0A0A0LHA7	A0A0A0KKD9	BZIP domain-containing protein.	Uncharacterized protein; Belongs to the heat shock protein 70 family.	0.469
Csa_3G817710	Csa_6G486760	A0A0A0LHA7	A0A0A0KFU7	BZIP domain-containing protein.	Uncharacterized protein.	0.415
Csa_3G817710	Csa_6G509680	A0A0A0LHA7	A0A0A0KJP8	BZIP domain-containing protein.	Uncharacterized protein.	0.415
Csa_4G022960	Csa_1G264000	A0A0A0KU47	A0A0A0LWI4	Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.	PRKCSH domain-containing protein.	0.949