(20 nodes) Transcription preinitiation complex assembly network (Cucumis sativus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Csa_7G449470	Uncharacterized protein. (179 aa)
	Csa_7G450680	Uncharacterized protein. (435 aa)
	Csa_6G418910	TAF domain-containing protein. (543 aa)
	Csa_6G452070	TFIID_20kDa domain-containing protein. (511 aa)
	Csa_6G446430	BTP domain-containing protein. (360 aa)
	Csa_6G502590	Uncharacterized protein. (443 aa)
	Csa_5G352590	SANT domain-containing protein. (769 aa)
	Csa_5G517200	TAFII55_N domain-containing protein. (296 aa)
	Csa_5G639490	BTP domain-containing protein. (376 aa)
	Csa_4G415910	TFIIB-type domain-containing protein. (312 aa)
	Csa_4G363410	BRF1 domain-containing protein. (296 aa)
	Csa_3G064190	TAF domain-containing protein. (535 aa)
	Csa_2G074100	Uncharacterized protein. (735 aa)
	Csa_3G740170	BTP domain-containing protein. (370 aa)
	Csa_3G038160	TAFII28 domain-containing protein. (220 aa)
	Csa_7G357030	Uncharacterized protein. (1899 aa)
	Csa_7G037630	TAF domain-containing protein. (544 aa)
	Csa_7G450520	TFIID_20kDa domain-containing protein. (680 aa)
	Csa_1G477510	Uncharacterized protein. (525 aa)
	Csa_1G572430	Uncharacterized protein. (735 aa)

Your Current Organism:

Cucumis sativus

NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Csa_1G477510	Csa_1G572430	A0A0A0M0A0	A0A0A0LZ47	Uncharacterized protein.	Uncharacterized protein.	0.540
Csa_1G477510	Csa_2G074100	A0A0A0M0A0	A0A0A0LHI6	Uncharacterized protein.	Uncharacterized protein.	0.429
Csa_1G477510	Csa_4G363410	A0A0A0M0A0	A0A0A0L0J7	Uncharacterized protein.	BRF1 domain-containing protein.	0.540
Csa_1G477510	Csa_4G415910	A0A0A0M0A0	A0A0A0KYQ5	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.668
Csa_1G477510	Csa_5G352590	A0A0A0M0A0	A0A0A0KPZ2	Uncharacterized protein.	SANT domain-containing protein.	0.959
Csa_1G477510	Csa_6G502590	A0A0A0M0A0	A0A0A0KM51	Uncharacterized protein.	Uncharacterized protein.	0.782
Csa_1G572430	Csa_1G477510	A0A0A0LZ47	A0A0A0M0A0	Uncharacterized protein.	Uncharacterized protein.	0.540
Csa_1G572430	Csa_4G363410	A0A0A0LZ47	A0A0A0L0J7	Uncharacterized protein.	BRF1 domain-containing protein.	0.540
Csa_1G572430	Csa_4G415910	A0A0A0LZ47	A0A0A0KYQ5	Uncharacterized protein.	TFIIB-type domain-containing protein.	0.668
Csa_1G572430	Csa_5G352590	A0A0A0LZ47	A0A0A0KPZ2	Uncharacterized protein.	SANT domain-containing protein.	0.980
Csa_1G572430	Csa_6G502590	A0A0A0LZ47	A0A0A0KM51	Uncharacterized protein.	Uncharacterized protein.	0.668
Csa_2G074100	Csa_1G477510	A0A0A0LHI6	A0A0A0M0A0	Uncharacterized protein.	Uncharacterized protein.	0.429
Csa_2G074100	Csa_3G064190	A0A0A0LHI6	A0A0A0L2A3	Uncharacterized protein.	TAF domain-containing protein.	0.821
Csa_2G074100	Csa_6G418910	A0A0A0LHI6	A0A0A0KEI5	Uncharacterized protein.	TAF domain-containing protein.	0.821
Csa_2G074100	Csa_6G452070	A0A0A0LHI6	A0A0A0KEX0	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.904
Csa_2G074100	Csa_6G502590	A0A0A0LHI6	A0A0A0KM51	Uncharacterized protein.	Uncharacterized protein.	0.426
Csa_2G074100	Csa_7G037630	A0A0A0LHI6	A0A0A0K1B8	Uncharacterized protein.	TAF domain-containing protein.	0.821
Csa_2G074100	Csa_7G449470	A0A0A0LHI6	A0A0A0KAU5	Uncharacterized protein.	Uncharacterized protein.	0.961
Csa_2G074100	Csa_7G450520	A0A0A0LHI6	A0A0A0K7T6	Uncharacterized protein.	TFIID_20kDa domain-containing protein.	0.904
Csa_3G038160	Csa_3G064190	A0A0A0L5S4	A0A0A0L2A3	TAFII28 domain-containing protein.	TAF domain-containing protein.	0.980