STRINGSTRING
Csa_3G354500 Csa_3G354500 Csa_2G431090 Csa_2G431090 Csa_6G078550 Csa_6G078550 Csa_6G446410 Csa_6G446410 Csa_3G687740 Csa_3G687740 Csa_2G372830 Csa_2G372830
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Csa_3G354500Uncharacterized protein. (547 aa)
Csa_2G431090RNA_pol_sigma70 domain-containing protein. (508 aa)
Csa_6G078550RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (580 aa)
Csa_6G446410RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of plastid-encoded RNA polymerase (PEP) to specific initiation sites and are then released. (562 aa)
Csa_3G687740Uncharacterized protein. (436 aa)
Csa_2G372830Uncharacterized protein. (560 aa)
Your Current Organism:
Cucumis sativus
NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers
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