45 items (Cucumis sativus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	Csa_4G338430	Uncharacterized protein. (303 aa)
	Csa_5G600940	Uncharacterized protein. (71 aa)
	Csa_5G169080	General transcription factor IIH subunit. (423 aa)
	Csa_5G162040	WAT1-related protein. (360 aa)
	Csa_5G152930	Uncharacterized protein. (821 aa)
	Csa_6G517270	RNA polymerase II transcription factor B subunit 2; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (451 aa)
	Csa_6G490020	CYCLIN domain-containing protein; Belongs to the cyclin family. (332 aa)
	Csa_6G400300	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1253 aa)
	Csa_6G193620	Histone H2B; Belongs to the histone H2B family. (152 aa)
	Csa_6G448180	Histone H2B; Belongs to the histone H2B family. (139 aa)
	Csa_6G400280	Uncharacterized protein. (114 aa)
	Csa_6G170410	Uncharacterized protein. (207 aa)
	Csa_7G450680	Uncharacterized protein. (435 aa)
	Csa_6G196710	Uncharacterized protein. (189 aa)
	Csa_7G374590	Uncharacterized protein. (207 aa)
	Csa_7G390040	Helicase ATP-binding domain-containing protein. (758 aa)
	Csa_1G613460	Uncharacterized protein. (506 aa)
	Csa_1G702030	Uncharacterized protein. (205 aa)
	Csa_1G599390	Uncharacterized protein. (200 aa)
	Csa_1G257900	MAT1 domain-containing protein. (189 aa)
	Csa_1G132130	Histone H2B; Belongs to the histone H2B family. (142 aa)
	Csa_1G132680	Histone H2B; Belongs to the histone H2B family. (142 aa)
	Csa_1G136770	Histone domain-containing protein; Belongs to the histone H2B family. (241 aa)
	Csa_1G043180	Uncharacterized protein. (51 aa)
	Csa_2G384980	Uncharacterized protein. (71 aa)
	Csa_2G072450	Uncharacterized protein. (295 aa)
	Csa_2G345940	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (116 aa)
	Csa_2G147910	Uncharacterized protein. (526 aa)
	Csa_3G877600	Uncharacterized protein. (142 aa)
	Csa_3G866520	Uncharacterized protein. (231 aa)
	Csa_3G811600	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1681 aa)
	Csa_3G734930	Histone H2B; Belongs to the histone H2B family. (138 aa)
	Csa_3G822200	Uncharacterized protein. (227 aa)
	Csa_3G180370	Uncharacterized protein. (143 aa)
	Csa_3G129690	Uncharacterized protein. (445 aa)
	Csa_3G122360	Uncharacterized protein. (626 aa)
	Csa_3G047880	Ig-like domain-containing protein. (391 aa)
	Csa_3G019970	WAT1-related protein. (337 aa)
	Csa_3G036500	Uncharacterized protein. (70 aa)
	Csa_4G338420	BSD domain-containing protein. (388 aa)
	Csa_4G165910	Uncharacterized protein. (233 aa)
	Csa_4G031020	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (146 aa)
	Csa_4G016400	SANTA domain-containing protein. (293 aa)
	Csa_4G011050	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. (144 aa)
	Csa_4G294920	SANTA domain-containing protein. (295 aa)

Your Current Organism:

Cucumis sativus

NCBI taxonomy Id: 3659
Other names: C. sativus, Cucumis sativus L., cucumber, cucumbers

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Csa_1G043180	Csa_1G132130	A0A0A0LQM4	A0A0A0LV55	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.453
Csa_1G043180	Csa_1G132680	A0A0A0LQM4	A0A0A0LST8	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.453
Csa_1G043180	Csa_1G136770	A0A0A0LQM4	A0A0A0LSH9	Uncharacterized protein.	Histone domain-containing protein; Belongs to the histone H2B family.	0.453
Csa_1G043180	Csa_1G257900	A0A0A0LQM4	A0A0A0LW26	Uncharacterized protein.	MAT1 domain-containing protein.	0.767
Csa_1G043180	Csa_1G599390	A0A0A0LQM4	A0A0A0LWT4	Uncharacterized protein.	Uncharacterized protein.	0.909
Csa_1G043180	Csa_1G702030	A0A0A0LQM4	A0A0A0LYM6	Uncharacterized protein.	Uncharacterized protein.	0.937
Csa_1G043180	Csa_2G072450	A0A0A0LQM4	A0A0A0LMM2	Uncharacterized protein.	Uncharacterized protein.	0.891
Csa_1G043180	Csa_2G147910	A0A0A0LQM4	A0A0A0LHZ6	Uncharacterized protein.	Uncharacterized protein.	0.737
Csa_1G043180	Csa_2G345940	A0A0A0LQM4	A0A0A0LKC4	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.973
Csa_1G043180	Csa_2G384980	A0A0A0LQM4	A0A0A0LPW4	Uncharacterized protein.	Uncharacterized protein.	0.975
Csa_1G043180	Csa_3G036500	A0A0A0LQM4	A0A0A0L4F5	Uncharacterized protein.	Uncharacterized protein.	0.693
Csa_1G043180	Csa_3G047880	A0A0A0LQM4	A0A0A0L637	Uncharacterized protein.	Ig-like domain-containing protein.	0.973
Csa_1G043180	Csa_3G122360	A0A0A0LQM4	A0A0A0L7G6	Uncharacterized protein.	Uncharacterized protein.	0.909
Csa_1G043180	Csa_3G129690	A0A0A0LQM4	A0A0A0L7W2	Uncharacterized protein.	Uncharacterized protein.	0.737
Csa_1G043180	Csa_3G180370	A0A0A0LQM4	A0A0A0L8L8	Uncharacterized protein.	Uncharacterized protein.	0.967
Csa_1G043180	Csa_3G734930	A0A0A0LQM4	A0A0A0LDR9	Uncharacterized protein.	Histone H2B; Belongs to the histone H2B family.	0.453
Csa_1G043180	Csa_3G811600	A0A0A0LQM4	A0A0A0LF53	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.936
Csa_1G043180	Csa_3G822200	A0A0A0LQM4	A0A0A0LCG9	Uncharacterized protein.	Uncharacterized protein.	0.842
Csa_1G043180	Csa_3G866520	A0A0A0LQM4	A0A0A0LGG8	Uncharacterized protein.	Uncharacterized protein.	0.974
Csa_1G043180	Csa_3G877600	A0A0A0LQM4	A0A0A0LGM1	Uncharacterized protein.	Uncharacterized protein.	0.967