STRINGSTRING
Smed_0183 Smed_0183 Smed_1725 Smed_1725 Smed_1726 Smed_1726 Smed_1727 Smed_1727 Smed_1728 Smed_1728 Smed_2062 Smed_2062 Smed_2063 Smed_2063 Smed_2064 Smed_2064 Smed_2066 Smed_2066 Smed_2142 Smed_2142 Smed_2143 Smed_2143 Smed_2144 Smed_2144 Smed_2145 Smed_2145 Smed_2146 Smed_2146 Smed_2311 Smed_2311 Smed_2312 Smed_2312 Smed_2313 Smed_2313 Smed_2314 Smed_2314 Smed_2315 Smed_2315 Smed_2316 Smed_2316 Smed_2694 Smed_2694 Smed_2696 Smed_2696 Smed_2697 Smed_2697 Smed_2698 Smed_2698 Smed_2947 Smed_2947 Smed_2948 Smed_2948 Smed_2949 Smed_2949 Smed_2950 Smed_2950 Smed_3167 Smed_3167 Smed_3168 Smed_3168 Smed_3169 Smed_3169 Smed_3170 Smed_3170
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smed_0183PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rsp:RSP_3677 ABC sugar transporter, ATPase subunit. (359 aa)
Smed_1725PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc04256 putative ATP-binding ABC transporter protein. (361 aa)
Smed_1726PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04257 putative transport system permease ABC transporter protein. (313 aa)
Smed_1727PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04258 putative transport system permease ABC transporter protein. (302 aa)
Smed_1728PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc04259 putative periplasmic binding ABC transporter signal peptide protein. (411 aa)
Smed_2062PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL120007 putative permease component of ABC transporter. (303 aa)
Smed_2063PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mll0851 putative multiple sugar transport system permease protein. (293 aa)
Smed_2064PFAM: extracellular solute-binding protein family 1; KEGG: bch:Bcen2424_4775 extracellular solute-binding protein, family 1. (449 aa)
Smed_2066PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpa:RPA3471 ABC transporter, ATP-binding protein. (349 aa)
Smed_2142PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rle:pRL100267 putative ATP-binding component of ABC transporter. (365 aa)
Smed_2143PFAM: protein of unknown function DUF1680; KEGG: rle:pRL100266 hypothetical protein. (648 aa)
Smed_2144PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100265 putative permease component of ABC transporter. (288 aa)
Smed_2145PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100264 putative permease component of ABC transporter. (362 aa)
Smed_2146PFAM: extracellular solute-binding protein family 1; KEGG: rle:pRL100263 putative substrate-binding component of ABC transporter. (414 aa)
Smed_2311PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20235 putative sugar ABC transporter ATP-binding protein. (361 aa)
Smed_2312KEGG: sme:SMb20234 hypothetical protein. (398 aa)
Smed_2313PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20233 putative sugar ABC transporter permease protein. (280 aa)
Smed_2314PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20232 putative suagr ABC transporter permease protein. (310 aa)
Smed_2315PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMb20231 putative ABC transporter sugar-binding protein. (455 aa)
Smed_2316Alanine racemase; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: sme:SMb20230 probable smc22-r protein. (334 aa)
Smed_2694PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PA00026 probable sugar ABC transporter, ATP-binding protein. (354 aa)
Smed_2696PFAM: extracellular solute-binding protein family 1; KEGG: rde:RD1_3621 ABC transporter, substrate-binding protein, putative. (498 aa)
Smed_2697PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3620 sugar ABC transporter permease protein, putative. (293 aa)
Smed_2698PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_3619 ABC transporter, permease protein, putative. (295 aa)
Smed_2947PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc02474 putative ATP-binding ABC transporter protein. (356 aa)
Smed_2948PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02473 putative transport system permease ABC transporter protein. (282 aa)
Smed_2949PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02472 putative transport system permease ABC transporter protein. (302 aa)
Smed_2950PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc02471 putative periplasmic binding ABC transporter protein. (435 aa)
Smed_3167PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc04393 putative ATP-binding ABC transporter protein. (370 aa)
Smed_3168PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04394 putative transport system permease ABC transporter protein. (293 aa)
Smed_3169PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc04395 putative transport system permease ABC transporter protein. (292 aa)
Smed_3170PFAM: extracellular solute-binding protein family 1; KEGG: sme:SMc04396 putative periplasmic binding protein. (414 aa)
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.