STRINGSTRING
Smed_1694 Smed_1694 Smed_1695 Smed_1695 znuC znuC Smed_1697 Smed_1697 fur fur Smed_2914 Smed_2914 Smed_2915 Smed_2915 Smed_2916 Smed_2916 Smed_2917 Smed_2917 Smed_2918 Smed_2918
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smed_1694Putative ferric uptake regulator, Fur family; KEGG: sme:SMc04242 putative zinc uptake regulation protein; Belongs to the Fur family. (132 aa)
Smed_1695PFAM: ABC-3 protein; KEGG: sme:SMc04243 probable high-affinity zinc uptake system membrane ABC transporter protein. (275 aa)
znuCABC transporter related; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family. (301 aa)
Smed_1697PFAM: periplasmic solute binding protein; KEGG: sme:SMc04245 probable high-affinity zinc uptake system ABC transporter protein. (347 aa)
furFerric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sme:SMc02510 probable ferric uptake regulation protein; Belongs to the Fur family. (142 aa)
Smed_2914PFAM: periplasmic solute binding protein; KEGG: sme:SMc02509 putative iron-binding periplasmic ABC transporter protein; Belongs to the bacterial solute-binding protein 9 family. (301 aa)
Smed_2915PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02508 putative iron transport ATP-binding ABC transporter protein. (311 aa)
Smed_2916ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: sme:SMc02507 putative iron transport system membrane ABC transporter protein. (285 aa)
Smed_2917ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: sme:SMc02506 putative iron transport system membrane ABC transporter protein. (285 aa)
Smed_2918KEGG: sme:SMc02505 hypothetical protein. (281 aa)
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
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