STRINGSTRING
Smed_2864 Smed_2864 Smed_2865 Smed_2865 Smed_2866 Smed_2866 Smed_2867 Smed_2867 Smed_2868 Smed_2868
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smed_2864KEGG: sme:SMc03121 putative periplasmic binding ABC transporter protein. (401 aa)
Smed_2865PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03120 putative ATP-binding ABC transporter protein. (261 aa)
Smed_2866PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc03119 putative ATP-binding ABC transporter protein. (233 aa)
Smed_2867PFAM: inner-membrane translocator; KEGG: sme:SMc03118 putative permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (295 aa)
Smed_2868PFAM: inner-membrane translocator; KEGG: sme:SMc03117 putative permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (330 aa)
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
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