STRINGSTRING
Smed_2313 Smed_2313 Smed_0294 Smed_0294 Smed_1700 Smed_1700 Smed_2144 Smed_2144 Smed_3402 Smed_3402 Smed_3278 Smed_3278 Smed_3276 Smed_3276
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smed_2313PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20233 putative sugar ABC transporter permease protein. (280 aa)
Smed_0294PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03063 alpha-glucosides transport system permease ABC transporter protein. (380 aa)
Smed_1700PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO1063 putative sugar transport integral membrane protein. (281 aa)
Smed_2144PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100265 putative permease component of ABC transporter. (288 aa)
Smed_3402PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02871 putative permease ABC transporter protein. (279 aa)
Smed_3278KEGG: sme:SMc02589 conserved hypothetical protein. (408 aa)
Smed_3276PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc02587 putative ATP-binding ABC transporter protein. (227 aa)
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
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