STRINGSTRING
Smed_2144 Smed_2144 Smed_2262 Smed_2262 Smed_2311 Smed_2311 Smed_2313 Smed_2313 Smed_2369 Smed_2369 Smed_3402 Smed_3402 Smed_2694 Smed_2694 metN metN ModB ModB modC modC Smed_3148 Smed_3148 Smed_2947 Smed_2947 Smed_3414 Smed_3414 Smed_0121 Smed_0121 pstB pstB Smed_0294 Smed_0294 Smed_0501 Smed_0501 Smed_0732 Smed_0732 crcB crcB Smed_1128 Smed_1128 Smed_1374 Smed_1374 Smed_1946 Smed_1946 Smed_2058 Smed_2058 Smed_2066 Smed_2066
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smed_2144PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rle:pRL100265 putative permease component of ABC transporter. (288 aa)
Smed_2262TIGRFAM: benzoate transporter; PFAM: Benzoate membrane transport protein; KEGG: sme:SMc02691 putative membrane transport protein. (410 aa)
Smed_2311PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMb20235 putative sugar ABC transporter ATP-binding protein. (361 aa)
Smed_2313PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20233 putative sugar ABC transporter permease protein. (280 aa)
Smed_2369PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc01823 putative ATP-binding ABC transporter protein. (263 aa)
Smed_3402PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02871 putative permease ABC transporter protein. (279 aa)
Smed_2694PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: ret:RHE_PA00026 probable sugar ABC transporter, ATP-binding protein. (354 aa)
metNABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system. (359 aa)
ModBMolybdate ABC transporter, inner membrane subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (233 aa)
modCMolybdate ABC transporter, ATPase subunit; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family. (357 aa)
Smed_3148PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mac:MA0063 sulfonate ABC transporter, ATP-binding protein. (266 aa)
Smed_2947PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: sme:SMc02474 putative ATP-binding ABC transporter protein. (356 aa)
Smed_3414PFAM: protein of unknown function DUF540; KEGG: sme:SMc02882 putative transmembrane protein. (250 aa)
Smed_0121TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc02143 putative phosphate transport system permease ABC transporter protein. (440 aa)
pstBPhosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family. (271 aa)
Smed_0294PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMc03063 alpha-glucosides transport system permease ABC transporter protein. (380 aa)
Smed_0501PFAM: BioY protein; KEGG: sme:SMc00964 hypothetical transmembrane protein. (187 aa)
Smed_0732PFAM: AzlC family protein; KEGG: sme:SMc00559 hypothetical protein. (217 aa)
crcBCrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family. (128 aa)
Smed_1128PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bms:BRA1187 taurine ABC transporter, ATP-binding protein. (267 aa)
Smed_1374Cation transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. (484 aa)
Smed_1946PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sme:SMc04300 probable ferric iron transport ATP-binding protein. (353 aa)
Smed_2058PFAM: AzlC family protein; KEGG: sme:SMc01882 hypothetical protein. (238 aa)
Smed_2066PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: rpa:RPA3471 ABC transporter, ATP-binding protein. (349 aa)
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.