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Smed_0731 Smed_0731 Smed_0690 Smed_0690 Smed_0653 Smed_0653 Smed_0600 Smed_0600 Smed_0588 Smed_0588 Smed_0576 Smed_0576 Smed_0572 Smed_0572 betI betI Smed_0540 Smed_0540 Smed_0475 Smed_0475 Smed_0431 Smed_0431 Smed_0393 Smed_0393 Smed_0391 Smed_0391 Smed_0384 Smed_0384 Smed_0382 Smed_0382 Smed_0369 Smed_0369 Smed_0366 Smed_0366 Smed_2345 Smed_2345 Smed_2284 Smed_2284 Smed_2248 Smed_2248 Smed_2244 Smed_2244 Smed_2230 Smed_2230 rpoD rpoD Smed_2199 Smed_2199 Smed_2186 Smed_2186 Smed_2172 Smed_2172 Smed_2151 Smed_2151 Smed_2139 Smed_2139 Smed_2133 Smed_2133 Smed_2116 Smed_2116 Smed_2097 Smed_2097 mraZ mraZ Smed_2069 Smed_2069 Smed_2067 Smed_2067 Smed_1997 Smed_1997 Smed_1974 Smed_1974 Smed_1904 Smed_1904 Smed_1794 Smed_1794 Smed_1788 Smed_1788 Smed_1770 Smed_1770 Smed_1733 Smed_1733 Smed_1708 Smed_1708 Smed_1694 Smed_1694 Smed_1663 Smed_1663 Smed_1609 Smed_1609 Smed_1579 Smed_1579 Smed_1503 Smed_1503 Smed_1461 Smed_1461 Smed_1433 Smed_1433 Smed_1414 Smed_1414 Smed_1395 Smed_1395 Smed_1261 Smed_1261 Smed_1247 Smed_1247 Smed_1246 Smed_1246 nusG nusG Smed_0965 Smed_0965 Smed_0877 Smed_0877 Smed_0839 Smed_0839 Smed_0814 Smed_0814 Smed_0808 Smed_0808 Smed_0753 Smed_0753 Smed_0735 Smed_0735 Smed_0364 Smed_0364 RirA RirA Smed_0323 Smed_0323 Smed_0306 Smed_0306 Smed_0239 Smed_0239 Smed_0233 Smed_0233 Smed_0224 Smed_0224 Smed_0184 Smed_0184 Smed_0177 Smed_0177 Smed_0154 Smed_0154 Smed_0092 Smed_0092 Smed_0076 Smed_0076 Smed_0073 Smed_0073 Smed_0065 Smed_0065 Smed_0015 Smed_0015 Smed_0004 Smed_0004 Smed_3567 Smed_3567 Smed_3563 Smed_3563 Smed_3557 Smed_3557 Smed_3513 Smed_3513 Smed_3506 Smed_3506 Smed_3502 Smed_3502 Smed_3500 Smed_3500 Smed_3490 Smed_3490 fur-2 fur-2 nusA nusA Smed_3422 Smed_3422 Smed_3408 Smed_3408 Smed_3382 Smed_3382 Smed_3373 Smed_3373 Smed_3360 Smed_3360 Smed_3321 Smed_3321 Smed_3290 Smed_3290 Smed_3224 Smed_3224 Smed_3156 Smed_3156 Smed_3145 Smed_3145 Smed_3135 Smed_3135 RpoH2 RpoH2 Smed_3080 Smed_3080 Smed_3061 Smed_3061 Smed_2978 Smed_2978 fur fur Smed_2902 Smed_2902 Smed_2900 Smed_2900 Smed_2863 Smed_2863 Smed_2843 Smed_2843 Smed_2834 Smed_2834 Smed_2824 Smed_2824 Smed_2797 Smed_2797 Smed_2773 Smed_2773 Smed_2765 Smed_2765 Smed_2734 Smed_2734 Smed_2731 Smed_2731 Smed_2730 Smed_2730 Smed_2725 Smed_2725 Smed_2713 Smed_2713 Smed_2669 Smed_2669 Smed_2647 Smed_2647 rpoH rpoH Smed_2599 Smed_2599 Smed_2581 Smed_2581 Smed_2576 Smed_2576 Smed_2484 Smed_2484 Smed_2477 Smed_2477 Smed_2468 Smed_2468 Smed_2458 Smed_2458 Smed_2441 Smed_2441 Smed_2432 Smed_2432 Smed_2418 Smed_2418 Smed_2417 Smed_2417 Smed_2411 Smed_2411 Smed_2368 Smed_2368 Smed_2363 Smed_2363 Smed_2350 Smed_2350 Smed_2309 Smed_2309
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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Smed_0731Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sme:SMc00558 putative transcription regulator protein. (285 aa)
Smed_0690PFAM: regulatory protein ArsR; KEGG: sme:SMc02639 putative transcription regulator protein. (110 aa)
Smed_0653Transcriptional regulator, HxlR family; PFAM: helix-turn-helix HxlR type; KEGG: sme:SMc02381 hypothetical protein. (133 aa)
Smed_0600Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcb:XC_3052 transcriptional regulator. (310 aa)
Smed_0588PFAM: Helix-turn-helix type 11 domain protein; KEGG: sme:SMc00107 putative transcription regulator protein. (237 aa)
Smed_0576PFAM: regulatory protein MarR; transcriptional regulator TrmB; KEGG: sme:SMc00098 putative transcription regulator protein. (158 aa)
Smed_0572Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00037 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (311 aa)
betITranscriptional regulator, TetR family; Repressor involved in choline regulation of the bet genes. (202 aa)
Smed_0540PFAM: regulatory protein ArsR; Helix-turn-helix type 11 domain protein; KEGG: sme:SMc00080 hypothetical protein. (227 aa)
Smed_0475Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sme:SMc00994 putative transcription regulator protein. (271 aa)
Smed_0431Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00929 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (327 aa)
Smed_0393Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00831 hypothetical transcription regulator protein. (298 aa)
Smed_0391PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc00829 putative transcription regulator protein. (285 aa)
Smed_0384Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00820 putative transcriptional regulator protein. (316 aa)
Smed_0382Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00818 putative hydrogen peroxide-inducible genes activator (morphology and auto-aggregation control protein); Belongs to the LysR transcriptional regulatory family. (317 aa)
Smed_0369PFAM: regulatory protein MarR; KEGG: rle:pRL120291 putative MarR family transcriptional regulator. (155 aa)
Smed_0366Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1632 putative LysR-family transcriptional regulator. (298 aa)
Smed_2345RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMc01506 putative RNA polymerase sigma-E factor (sigma-24) protein; Belongs to the sigma-70 factor family. ECF subfamily. (184 aa)
Smed_2284RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMc02713 putative RNA polymerase sigma-E factor (sigma-24) protein; Belongs to the sigma-70 factor family. ECF subfamily. (189 aa)
Smed_2248Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pae:PA3124 probable transcriptional regulator. (320 aa)
Smed_2244Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc01592 putative transcription regulator protein. (160 aa)
Smed_2230Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01570 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (296 aa)
rpoDRNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth. (684 aa)
Smed_2199Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01664 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (281 aa)
Smed_2186Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01651 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (302 aa)
Smed_2172PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc01636 putative transcription regulator protein. (329 aa)
Smed_2151Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; regulatory protein ArsR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: sme:SMc01615 putative transcription regulator protein. (261 aa)
Smed_2139PFAM: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc01610 putative transcription regulator protein. (294 aa)
Smed_2133Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sme:SMc01602 hypothetical protein. (292 aa)
Smed_2116Methyltransferase type 11; PFAM: regulatory protein ArsR; Methyltransferase type 11; Methyltransferase type 12; KEGG: sme:SMc01842 putative methyltransferase transcription regulator protein. (340 aa)
Smed_2097Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: pol:Bpro_4368 transcriptional regulator, LysR family. (306 aa)
mraZKEGG: sme:SMc01857 mraZ protein; Belongs to the MraZ family. (146 aa)
Smed_2069Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcb:XC_2486 galactose-binding protein regulator; Belongs to the LysR transcriptional regulatory family. (326 aa)
Smed_2067Putative transcriptional regulator, RpiR family; KEGG: rle:RL1496 putative sugar isomerase family protein. (133 aa)
Smed_1997RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMc01419 probable RNA polymerase sigma factor protein; Belongs to the sigma-70 factor family. ECF subfamily. (184 aa)
Smed_1974Putative transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sme:SMc01406 putative transcription regulator protein. (514 aa)
Smed_1904KEGG: sme:SMb20548 hypothetical protein. (205 aa)
Smed_1794Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMc04169 putative transcription regulator protein. (338 aa)
Smed_1788Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc04163 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (298 aa)
Smed_1770Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc04315 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (293 aa)
Smed_1733SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc04264 putative transcription regulator protein. (305 aa)
Smed_1708Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rsp:RSP_3893 transcriptional regulator, GntR family. (211 aa)
Smed_1694Putative ferric uptake regulator, Fur family; KEGG: sme:SMc04242 putative zinc uptake regulation protein; Belongs to the Fur family. (132 aa)
Smed_1663PFAM: transcription antitermination protein NusG; KEGG: atc:AGR_C_797 transcription antitermination protein NusG. (219 aa)
Smed_1609PFAM: regulatory protein ArsR; KEGG: sme:SMc04220 putative transcription regulator protein. (110 aa)
Smed_1579Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc00146 putative transcription regulator protein. (173 aa)
Smed_1503Putative transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; KEGG: sme:SMc00490 putative transcription regulator protein. (472 aa)
Smed_1461Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa1954 putative LysR-family transcriptional regulator. (340 aa)
Smed_1433Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMc00256 putative transcription regulator protein. (341 aa)
Smed_1414PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc00241 putative transcription regulator protein. (250 aa)
Smed_1395Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: ret:RHE_PB00016 probable transcriptional regulator protein, LysR family. (296 aa)
Smed_1261Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rru:Rru_A2875 transcriptional regulator, LysR family. (302 aa)
Smed_1247Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01225 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (298 aa)
Smed_1246SMART: regulatory protein ArsR; KEGG: sme:SMc01226 putative transcription regulator protein. (96 aa)
nusGNusG antitermination factor; Participates in transcription elongation, termination and antitermination. (176 aa)
Smed_0965Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01330 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (314 aa)
Smed_0877Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc01908 putative transcription regulator protein. (159 aa)
Smed_0839Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMa0557 LysR family transcriptional regulator, probable. (297 aa)
Smed_0814Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc01768 putative transcription regulator protein. (170 aa)
Smed_0808PFAM: regulatory protein ArsR; KEGG: sme:SMc01762 putative transcription regulator protein. (112 aa)
Smed_0753Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: mlo:mlr7672 transcriptional regulator. (302 aa)
Smed_0735Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc00562 putative transcription regulator protein. (150 aa)
Smed_0364PFAM: GntR domain protein; KEGG: pde:Pden_3072 transcriptional regulator, GntR family. (272 aa)
RirATIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: sme:SMc00785 conserved hypothetical protein. (154 aa)
Smed_0323Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00780 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (293 aa)
Smed_0306Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; KEGG: sme:SMc00766 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (291 aa)
Smed_0239PFAM: response regulator receiver; KEGG: sme:SMc03011 chemotaxis regulator protein. (129 aa)
Smed_0233KEGG: sme:SMc03005 putative chemotaxis protein CheX. (97 aa)
Smed_0224Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; regulatory protein DeoR; KEGG: sme:SMc02323 putative transcription regulator protein. (270 aa)
Smed_0184Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: rsp:RSP_3676 transcriptional regulator, GntR family. (228 aa)
Smed_0177Transcriptional regulator, TetR family; PFAM: regulatory protein TetR; KEGG: sme:SMc02261 putative transcription regulator protein. (208 aa)
Smed_0154TIGRFAM: putative transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: sme:SMc02238 hypothetical protein. (168 aa)
Smed_0092Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. (1233 aa)
Smed_0076KEGG: sme:SMc01725 hypothetical protein. (236 aa)
Smed_0073TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: Ada metal-binding domain protein; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: sme:SMc01728 putative transcription regulator protein. (370 aa)
Smed_0065Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01092 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (302 aa)
Smed_0015RNA polymerase, sigma 54 subunit, RpoN; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (513 aa)
Smed_0004Putative RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMc01150 putative RNA polymerase sigma-70 factor, ECF subfamily. (427 aa)
Smed_3567Transcriptional regulator, BadM/Rrf2 family; PFAM: protein of unknown function UPF0074; Helix-turn-helix type 11 domain protein; KEGG: sme:SMc01160 hypothetical protein. (152 aa)
Smed_3563Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS); KEGG: sme:SMc01164 hypothetical protein. (284 aa)
Smed_3557Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; AraC protein arabinose-binding/dimerisation; KEGG: sme:SMc00429 putative transcription regulator protein. (269 aa)
Smed_3513PFAM: regulatory protein ArsR; KEGG: ret:RHE_CH01079 probable transcriptional regulator protein, ArsR family. (109 aa)
Smed_3506Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc00384 putative transcription regulation protein. (169 aa)
Smed_3502RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; KEGG: sme:SMc04051 putative RNA polymerase sigma-E factor (sigma-24) protein. (220 aa)
Smed_3500Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc00380 putative transcription regulator protein. (164 aa)
Smed_3490Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc00370 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (296 aa)
fur-2Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sme:SMc00329 putative iron response regulator protein; Belongs to the Fur family. (140 aa)
nusANusA antitermination factor; Participates in both transcription termination and antitermination. (552 aa)
Smed_3422Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc02893 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (304 aa)
Smed_3408Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMc02876 putative transcription regulator protein. (254 aa)
Smed_3382Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc02851 putative transcription regulator protein. (147 aa)
Smed_3373TIGRFAM: methylated-DNA--protein-cysteine methyltransferase; PFAM: helix-turn-helix- domain containing protein AraC type; Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: sme:SMc02841 putative methylated-DNA--protein-cysteine methyltransferase transcription regulator. (290 aa)
Smed_3360Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc02826 putative transcription regulator protein. (114 aa)
Smed_3321PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc04143 putative transcription regulator protein. (240 aa)
Smed_3290Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMc02609 putative transcription regulator protein. (324 aa)
Smed_3224Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc02777 putative transcription regulator protein. (292 aa)
Smed_3156Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc04882 probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (297 aa)
Smed_3145Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: pol:Bpro_2210 transcriptional regulator, GntR family. (220 aa)
Smed_3135Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; regulatory protein DeoR; KEGG: sme:SMc03890 putative transcription regulator protein. (265 aa)
RpoH2RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (288 aa)
Smed_3080PFAM: regulatory protein ArsR; KEGG: sme:SMc03843 putative transcription regulator protein. (104 aa)
Smed_3061Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc03824 putative transcription regulator protein. (159 aa)
Smed_2978PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: bte:BTH_I1202 transcriptional regulator, GntR family. (229 aa)
furFerric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: sme:SMc02510 probable ferric uptake regulation protein; Belongs to the Fur family. (142 aa)
Smed_2902Transcriptional regulator, DeoR family; PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; regulatory protein DeoR; KEGG: sme:SMc02521 putative glycerol-3-phosphate regulon repressor transcription regulator protein. (254 aa)
Smed_2900Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc02523 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (298 aa)
Smed_2863Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc03122 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (315 aa)
Smed_2843Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMc03140 putative transcription regulator protein. (243 aa)
Smed_2834Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc03209 putative transcription regulator protein. (152 aa)
Smed_2824Putative transcriptional regulator, ModE family; PFAM: regulatory protein LysR; KEGG: sme:SMc03199 putative molybdenum transport associated protein. (152 aa)
Smed_2797Transcription activator effector binding; PFAM: helix-turn-helix- domain containing protein AraC type; transcription activator effector binding; KEGG: sme:SMc03170 putative transcription regulator protein. (279 aa)
Smed_2773Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc02984 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (304 aa)
Smed_2765Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc02976 putative transcription regulator protein. (167 aa)
Smed_2734Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc04055 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (303 aa)
Smed_2731Transcriptional regulator, MarR family; PFAM: regulatory protein MarR; KEGG: sme:SMc04052 putative transcription regulator protein. (148 aa)
Smed_2730RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70 region 4 type 2; KEGG: sme:SMc04051 putative RNA polymerase sigma-E factor (sigma-24) protein; Belongs to the sigma-70 factor family. ECF subfamily. (174 aa)
Smed_2725PFAM: regulatory protein MarR; KEGG: rle:RL0596 putative MarR family transcriptional regulator. (155 aa)
Smed_2713Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:RL4087 putative LysR family transcriptional regulator. (281 aa)
Smed_2669PFAM: regulatory protein ArsR; KEGG: sme:SMc03998 hypothetical transcription regulator protein. (86 aa)
Smed_2647Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc03975 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (326 aa)
rpoHRNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes. (301 aa)
Smed_2599Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: sme:SMa1725 putative AraC-family transcriptional regulator. (343 aa)
Smed_2581Transcriptional regulator, GntR family; TIGRFAM: histidine utilization repressor; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMc00674 putative histidine utilization repressor transcription regulator protein. (247 aa)
Smed_2576PFAM: helix-turn-helix- domain containing protein AraC type; AraC-type transcriptional regulator domain protein; KEGG: sme:SMc00679 putative transcription regulator protein. (313 aa)
Smed_2484PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMa0246 putative GntR-family transcriptional regulator. (238 aa)
Smed_2477Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG: sme:SMc02340 putative transcription regulator protein. (244 aa)
Smed_2468Transcriptional regulator, RpiR family; PFAM: helix-turn-helix protein RpiR; sugar isomerase (SIS); KEGG: sme:SMc02460 hypothetical protein. (296 aa)
Smed_2458Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc02036 putative transcription regulator protein. (235 aa)
Smed_2441Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc02030 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (301 aa)
Smed_2432Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMb20715 putative transcriptional regulator, LysR family protein. (296 aa)
Smed_2418PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc01975 putative transcription regulator protein. (238 aa)
Smed_2417Transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; GntR domain protein; KEGG: sme:SMc01974 putative transcription regulator protein. (230 aa)
Smed_2411Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01968 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (338 aa)
Smed_2368PFAM: Cupin domain protein; Cupin 2 conserved barrel domain protein; KEGG: sme:SMc01822 hypothetical protein. (137 aa)
Smed_2363Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sme:SMc01817 putative transcription regulator protein; Belongs to the LysR transcriptional regulatory family. (299 aa)
Smed_2350Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: rle:pRL120548 putative LysR family transcriptional regulator. (298 aa)
Smed_2309PFAM: regulatory protein ArsR; KEGG: ret:RHE_CH03089 transcriptional regulator protein (repressor of nodulation genes), ArsR family. (114 aa)
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
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