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gpsA gpsA Smed_3036 Smed_3036 Smed_3037 Smed_3037 pyrD pyrD Smed_0484 Smed_0484 Smed_0610 Smed_0610 Smed_0843 Smed_0843 nuoB nuoB nuoC nuoC Smed_0893 Smed_0893 Smed_0894 Smed_0894 nuoI nuoI Smed_3311 Smed_3311 nuoK1 nuoK1 Smed_0948 Smed_0948 Smed_1077 Smed_1077 Smed_1078 Smed_1078 gcvP gcvP gcvH gcvH GcvT GcvT Smed_1233 Smed_1233 Smed_1270 Smed_1270 Smed_1532 Smed_1532 Smed_1540 Smed_1540 Smed_1968 Smed_1968 Smed_2156 Smed_2156 apt apt Smed_2360 Smed_2360 Smed_2361 Smed_2361 Smed_2692 Smed_2692 GlpD GlpD GltD GltD Smed_2808 Smed_2808 Smed_2827 Smed_2827 Smed_2828 Smed_2828 Smed_2882 Smed_2882 Smed_2897 Smed_2897 Smed_2898 Smed_2898 Smed_2899 Smed_2899 Smed_3316 Smed_3316 Smed_3538 Smed_3538 GlpD-2 GlpD-2 Smed_2940 Smed_2940 SucA SucA Smed_3038 Smed_3038 SdhA SdhA Smed_2959 Smed_2959
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
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a 3D structure is known or predicted
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gpsAPFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; Ketopantoate reductase ApbA/PanE domain protein; KEGG: sme:SMc03229 probable glycerol-3-phosphate dehydrogenase protein. (331 aa)
Smed_3036Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family. (111 aa)
Smed_3037PFAM: alpha/beta hydrolase fold; biotin/lipoyl attachment domain-containing protein; E3 binding domain protein; KEGG: vei:Veis_2228 alpha/beta hydrolase fold. (437 aa)
pyrDDihydroorotate oxidase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily. (362 aa)
Smed_0484PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sme:SMc00981 putative ferredoxin protein. (364 aa)
Smed_0610NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sme:SMc00054 putative cation efflux system protein. (520 aa)
Smed_0843PFAM: Carboxymuconolactone decarboxylase; KEGG: sme:SMa0559 4-carboxymuconolactone decarboxylase, putative. (259 aa)
nuoBNADH-quinone oxidoreductase, B subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (192 aa)
nuoCNADH (or F420H2) dehydrogenase, subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family. (201 aa)
Smed_0893TIGRFAM: NADH-quinone oxidoreductase, E subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: sme:SMc01917 NADH dehydrogenase I chain E. (273 aa)
Smed_0894NADH-quinone oxidoreductase, F subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family. (434 aa)
nuoINADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. (163 aa)
Smed_3311PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rle:pRL110552 putative aminomethyltransferase/glycine cleavage protein; Belongs to the GcvT family. (377 aa)
nuoK1NADH-ubiquinone oxidoreductase chain 4L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family. (102 aa)
Smed_0948PFAM: NADH:ubiquinone oxidoreductase 17.2 kD subunit; KEGG: sme:SMc01348 NADH-ubiquinone oxidoreductase. (131 aa)
Smed_1077Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (465 aa)
Smed_1078Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (457 aa)
gcvPGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. (954 aa)
gcvHGlycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. (120 aa)
GcvTTIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: sme:SMc02047 probable aminomethyltransferase (glycine cleavage system T protein). (379 aa)
Smed_1233Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. (1263 aa)
Smed_1270KEGG: rle:RL3837 hypothetical protein. (261 aa)
Smed_1532TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; KEGG: sme:SMc00465 probable 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase protein. (174 aa)
Smed_1540Cytochrome b/b6 domain; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (426 aa)
Smed_1968PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: sme:SMc04452 putative NADH dehydrogenase transmembrane protein. (422 aa)
Smed_2156PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc01620 putative erythritol phosphate dehydrogenase protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (517 aa)
aptAdenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. (180 aa)
Smed_2360PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMc01814 probable glutamate synthase small chain protein. (453 aa)
Smed_2361TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate dehydrogenase; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sme:SMc01815 dihydropyrimidine dehydrogenase. (437 aa)
Smed_2692PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: ret:RHE_PA00028 putative glycerol-3-phosphate dehydrogenase (NAD(P)+) protein; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family. (338 aa)
GlpDPFAM: FAD dependent oxidoreductase; KEGG: rpa:RPA4410 glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (511 aa)
GltDTIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sme:SMc04026 probable glutamate synthase small chain protein. (485 aa)
Smed_2808TIGRFAM: multicomponent K+/H+ antiporter, subunit 4; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: sme:SMc03181 multicomponent K+:H+ antiporter subunit D. (539 aa)
Smed_2827PFAM: Transketolase central region; Transketolase domain protein; KEGG: sme:SMc03202 probable 2-oxoisovalerate dehydrogenase beta subunit protein. (337 aa)
Smed_2828PFAM: biotin/lipoyl attachment domain-containing protein; catalytic domain of components of various dehydrogenase complexes; E3 binding domain protein; KEGG: sme:SMc03203 probable lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex protein. (426 aa)
Smed_2882PFAM: aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; KEGG: sme:SMc03102 putative carbon monoxide dehydrogenase large subunit transmembrane protein. (781 aa)
Smed_2897TIGRFAM: formate dehydrogenase, alpha subunit; PFAM: ferredoxin; 4Fe-4S ferredoxin iron-sulfur binding domain protein; molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; KEGG: sme:SMc04444 probable NAD-dependent formate dehydrogenase alpha subunit protein. (959 aa)
Smed_2898PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; KEGG: sme:SMc02525 putative NAD-dependent formate dehydrogenase beta subunit protein. (518 aa)
Smed_2899PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: sme:SMc02524 putative NAD-dependent formate dehydrogenase gamma subunit protein. (159 aa)
Smed_3316PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: sme:SMc04148 putative aminomethyltransferase protein; Belongs to the GcvT family. (789 aa)
Smed_3538NADH dehydrogenase (ubiquinone); PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; Male sterility domain; KEGG: sme:SMc00410 putative oxidoreductase protein. (326 aa)
GlpD-2PFAM: FAD dependent oxidoreductase; KEGG: sme:SMc02520 putative glycerol-3-phosphate dehydrogenase protein; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family. (503 aa)
Smed_29402-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2). (415 aa)
SucATIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: dehydrogenase E1 component; Transketolase central region; KEGG: sme:SMc02482 probable 2-oxoglutarate dehydrogenase E1 component protein. (998 aa)
Smed_3038PFAM: Transketolase central region; Transketolase domain protein; KEGG: gsu:GSU2436 dehydrogenase complex, E1 component, beta subunit. (325 aa)
SdhATIGRFAM: succinate dehydrogenase, flavoprotein subunit; succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: sme:SMc02465 probable succinate dehydrogenase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (613 aa)
Smed_2959TIGRFAM: Succinate dehydrogenase cytochrome b556 subunit; PFAM: succinate dehydrogenase cytochrome b subunit; KEGG: sme:SMc02463 probable succinate dehydrogenase cytochrome B-556 subunit transmembrane protein. (130 aa)
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
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