STRINGSTRING
Smed_2917 Smed_2917 Smed_1695 Smed_1695 Smed_2916 Smed_2916
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smed_2917ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: sme:SMc02506 putative iron transport system membrane ABC transporter protein. (285 aa)
Smed_1695PFAM: ABC-3 protein; KEGG: sme:SMc04243 probable high-affinity zinc uptake system membrane ABC transporter protein. (275 aa)
Smed_2916ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: sme:SMc02507 putative iron transport system membrane ABC transporter protein. (285 aa)
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
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