STRINGSTRING
Smed_3339 Smed_3339 Smed_3338 Smed_3338 Smed_3229 Smed_3229 Smed_3127 Smed_3127 Smed_3066 Smed_3066 Smed_3040 Smed_3040 Smed_2868 Smed_2868 Smed_2867 Smed_2867 Smed_2473 Smed_2473 Smed_2442 Smed_2442 Smed_2397 Smed_2397 Smed_2396 Smed_2396 Smed_2042 Smed_2042 Smed_0778 Smed_0778 Smed_0914 Smed_0914 Smed_0344 Smed_0344 Smed_0228 Smed_0228 Smed_0227 Smed_0227 Smed_0103 Smed_0103 Smed_1416 Smed_1416 Smed_1417 Smed_1417
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smed_3339PFAM: inner-membrane translocator; KEGG: sme:SMc04125 putative transport system permease ABC transporter protein. (323 aa)
Smed_3338PFAM: inner-membrane translocator; KEGG: sme:SMc04126 putative transport system permease ABC transporter protein. (377 aa)
Smed_3229Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sme:SMc02772 putative sugar ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (324 aa)
Smed_3127Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: atc:AGR_C_3488 bifunctional carbohydrate binding and transport protein; Belongs to the binding-protein-dependent transport system permease family. (324 aa)
Smed_3066PFAM: inner-membrane translocator; KEGG: sme:SMc03829 putative transport system permease ABC transporter protein. (292 aa)
Smed_3040Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: vfi:VF1446 ribose transport system permease protein RbsC. (348 aa)
Smed_2868PFAM: inner-membrane translocator; KEGG: sme:SMc03117 putative permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (330 aa)
Smed_2867PFAM: inner-membrane translocator; KEGG: sme:SMc03118 putative permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (295 aa)
Smed_2473Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sme:SMc02452 putative transport system permease ABC transporter protein. (330 aa)
Smed_2442Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sme:SMc02031 putative permease protein; Belongs to the binding-protein-dependent transport system permease family. (349 aa)
Smed_2397PFAM: inner-membrane translocator; KEGG: sme:SMc01951 probable high-affinity branched-chain amino acid transport permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (300 aa)
Smed_2396PFAM: inner-membrane translocator; KEGG: sme:SMc01950 probable high-affinity branched-chain amino acid transport permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (461 aa)
Smed_2042Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: mlo:mll7365 ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. (328 aa)
Smed_0778PFAM: inner-membrane translocator; KEGG: sme:SMc00598 putative branched-chain amino acid transport permease protein; Belongs to the binding-protein-dependent transport system permease family. (298 aa)
Smed_0914Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sme:SMc02019 putative permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (336 aa)
Smed_0344Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: msm:MSMEG_1373 ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components. (347 aa)
Smed_0228Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sme:SMc03001 putative permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (334 aa)
Smed_0227Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sme:SMc03000 putative permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (326 aa)
Smed_0103Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sme:SMc02170 putative permease ABC transporter protein; Belongs to the binding-protein-dependent transport system permease family. (360 aa)
Smed_1416PFAM: inner-membrane translocator; KEGG: sme:SMc00244 putative transport system permease ABC transporter protein. (306 aa)
Smed_1417PFAM: inner-membrane translocator; KEGG: sme:SMc00243 putative transport system permease ABC transporter protein. (364 aa)
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.