STRINGSTRING
Smed_0190 Smed_0190 Smed_0422 Smed_0422 Smed_2665 Smed_2665 Smed_2743 Smed_2743 glk glk
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Smed_0190PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rsp:RSP_3670 putative oxidoreductase myo-inositol 2-dehydrogenase. (331 aa)
Smed_0422PFAM: inositol monophosphatase; KEGG: sme:SMc00896 putative sulfite biosynthesis protein. (272 aa)
Smed_2665PFAM: inositol monophosphatase; KEGG: sme:SMc03994 putative myo-inositol-1(or 4)-monophosphatase. (266 aa)
Smed_2743PFAM: phosphoglucomutase/phosphomannomutase; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: sme:SMc03925 phosphoglucomutase. (542 aa)
glkTIGRFAM: glucokinase; PFAM: Glucokinase; KEGG: sme:SMc02835 probable glucokinase transmembrane protein; Belongs to the bacterial glucokinase family. (339 aa)
Your Current Organism:
Sinorhizobium medicae
NCBI taxonomy Id: 366394
Other names: Ensifer medicae WSM419, S. medicae WSM419, Sinorhizobium medicae WSM419
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