56 items (Penicillium coprophilum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A1V6U827	PKS_ER domain-containing protein. (331 aa)
	A0A1V6U9L3	Uncharacterized protein. (559 aa)
	A0A1V6U9N3	Uncharacterized protein. (325 aa)
	A0A1V6UCG9	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (502 aa)
	A0A1V6UCN3	Uncharacterized protein. (450 aa)
	A0A1V6UEL0	Uncharacterized protein. (259 aa)
	A0A1V6UEP3	Uncharacterized protein. (512 aa)
	A0A1V6UER4	PKS_ER domain-containing protein. (352 aa)
	A0A1V6UF84	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (499 aa)
	A0A1V6UH31	PKS_ER domain-containing protein. (351 aa)
	A0A1V6UHV4	Uncharacterized protein. (378 aa)
	A0A1V6UJ01	Uncharacterized protein. (601 aa)
	A0A1V6UJ66	Uncharacterized protein. (564 aa)
	A0A1V6UJD7	Aldedh domain-containing protein. (498 aa)
	A0A1V6UKC8	Succinate-semialdehyde dehydrogenase. (532 aa)
	A0A1V6UKM6	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (465 aa)
	A0A1V6UKX8	PKS_ER domain-containing protein. (361 aa)
	A0A1V6ULQ9	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (497 aa)
	A0A1V6UND2	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (483 aa)
	A0A1V6UNK9	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (498 aa)
	A0A1V6UNP6	Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (462 aa)
	A0A1V6UNS6	PKS_ER domain-containing protein. (352 aa)
	A0A1V6UNV7	PKS_ER domain-containing protein. (367 aa)
	A0A1V6UP71	Uncharacterized protein. (128 aa)
	A0A1V6UP73	Uncharacterized protein. (488 aa)
	A0A1V6URF5	PKS_ER domain-containing protein. (350 aa)
	A0A1V6URK4	Uncharacterized protein. (572 aa)
	A0A1V6URP1	FMN hydroxy acid dehydrogenase domain-containing protein. (413 aa)
	A0A1V6URZ0	Uncharacterized protein. (338 aa)
	A0A1V6USE4	DUF4396 domain-containing protein. (217 aa)
	A0A1V6USH5	Uncharacterized protein. (262 aa)
	A0A1V6USP6	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (493 aa)
	A0A1V6UTX7	Uncharacterized protein. (323 aa)
	A0A1V6UUE6	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (502 aa)
	A0A1V6UV70	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family. (475 aa)
	A0A1V6UVA9	PKS_ER domain-containing protein. (331 aa)
	A0A1V6UX93	Aldedh domain-containing protein. (516 aa)
	A0A1V6UX94	PKS_ER domain-containing protein. (389 aa)
	A0A1V6UYB4	Acetyl-coenzyme A synthetase. (670 aa)
	A0A1V6UYP9	Aldedh domain-containing protein. (588 aa)
	A0A1V6UYS7	Zn(2)-C6 fungal-type domain-containing protein. (960 aa)
	A0A1V6UYW3	Uncharacterized protein. (286 aa)
	A0A1V6V0U8	Uncharacterized protein. (371 aa)
	A0A1V6V1F1	Uncharacterized protein. (572 aa)
	A0A1V6V289	PKS_ER domain-containing protein. (381 aa)
	A0A1V6V2D2	PKS_ER domain-containing protein. (367 aa)
	A0A1V6V2K4	Uncharacterized protein. (241 aa)
	A0A1V6V2V9	Uncharacterized protein. (107 aa)
	A0A1V6V344	Uncharacterized protein. (360 aa)
	A0A1V6V6L3	Uncharacterized protein. (612 aa)
	A0A1V6V6V1	Fe-ADH domain-containing protein. (496 aa)
	A0A1V6V7D8	Probable acetate kinase. (403 aa)
	A0A1V6V7K9	Fe-ADH domain-containing protein. (357 aa)
	A0A1V6V8F4	PKS_ER domain-containing protein. (362 aa)
	A0A1V6V9W7	Uncharacterized protein. (573 aa)
	A0A1V6VAB3	Fe-ADH domain-containing protein. (407 aa)

Your Current Organism:

Penicillium coprophilum

NCBI taxonomy Id: 36646
Other names: P. coprophilum, Penicillium coprophilum var. coprophilum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6U827	A0A1V6U9L3	PKS_ER domain-containing protein.	Uncharacterized protein.	0.518
A0A1V6U827	A0A1V6U9N3	PKS_ER domain-containing protein.	Uncharacterized protein.	0.495
A0A1V6U827	A0A1V6UCG9	PKS_ER domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.452
A0A1V6U827	A0A1V6UF84	PKS_ER domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.452
A0A1V6U827	A0A1V6UH31	PKS_ER domain-containing protein.	PKS_ER domain-containing protein.	0.495
A0A1V6U827	A0A1V6UJ01	PKS_ER domain-containing protein.	Uncharacterized protein.	0.518
A0A1V6U827	A0A1V6UJD7	PKS_ER domain-containing protein.	Aldedh domain-containing protein.	0.452
A0A1V6U827	A0A1V6UKC8	PKS_ER domain-containing protein.	Succinate-semialdehyde dehydrogenase.	0.452
A0A1V6U827	A0A1V6UKM6	PKS_ER domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.452
A0A1V6U827	A0A1V6ULQ9	PKS_ER domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.452
A0A1V6U827	A0A1V6UND2	PKS_ER domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.452
A0A1V6U827	A0A1V6UP73	PKS_ER domain-containing protein.	Uncharacterized protein.	0.452
A0A1V6U827	A0A1V6URK4	PKS_ER domain-containing protein.	Uncharacterized protein.	0.518
A0A1V6U827	A0A1V6USP6	PKS_ER domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.452
A0A1V6U827	A0A1V6UUE6	PKS_ER domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.452
A0A1V6U827	A0A1V6UV70	PKS_ER domain-containing protein.	Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.	0.452
A0A1V6U827	A0A1V6UX94	PKS_ER domain-containing protein.	PKS_ER domain-containing protein.	0.495
A0A1V6U827	A0A1V6UYB4	PKS_ER domain-containing protein.	Acetyl-coenzyme A synthetase.	0.478
A0A1V6U827	A0A1V6V0U8	PKS_ER domain-containing protein.	Uncharacterized protein.	0.495
A0A1V6U827	A0A1V6V289	PKS_ER domain-containing protein.	PKS_ER domain-containing protein.	0.495