STRINGSTRING
Caul_0814 Caul_0814 Caul_1315 Caul_1315 Caul_3247 Caul_3247 Caul_4356 Caul_4356 Caul_4604 Caul_4604
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Caul_0814PFAM: AMP-dependent synthetase and ligase; KEGG: ccr:CC_3188 4-coumarate-CoA ligase, putative. (517 aa)
Caul_1315PFAM: AMP-dependent synthetase and ligase; KEGG: ccr:CC_0922 acyl-CoA synthase. (965 aa)
Caul_3247PFAM: AMP-dependent synthetase and ligase; KEGG: pla:Plav_1034 AMP-dependent synthetase and ligase. (497 aa)
Caul_4356PFAM: AMP-dependent synthetase and ligase; KEGG: ccr:CC_0391 feruloyl-CoA synthase. (603 aa)
Caul_4604PFAM: AMP-dependent synthetase and ligase; KEGG: swi:Swit_1599 AMP-dependent synthetase and ligase. (492 aa)
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.