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Caul_0556 Caul_0556 Caul_0557 Caul_0557 Caul_0558 Caul_0558 Caul_0559 Caul_0559 Caul_0560 Caul_0560 Caul_0561 Caul_0561 Caul_0562 Caul_0562 Caul_0563 Caul_0563 Caul_2363 Caul_2363 Caul_2364 Caul_2364 Caul_2365 Caul_2365 Caul_2366 Caul_2366 Caul_2367 Caul_2367 Caul_3934 Caul_3934 Caul_3935 Caul_3935 Caul_3936 Caul_3936 Caul_3937 Caul_3937
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Caul_0556PFAM: regulatory protein TetR; KEGG: nar:Saro_1684 transcriptional regulator, TetR family. (228 aa)
Caul_0557PFAM: methylamine dehydrogenase heavy subunit; KEGG: nar:Saro_1685 amine dehydrogenase. (386 aa)
Caul_0558KEGG: nar:Saro_1686 hypothetical protein. (162 aa)
Caul_0559PFAM: Redoxin domain protein; KEGG: nar:Saro_1687 hypothetical protein. (197 aa)
Caul_0560Amine dehydrogenase; Methylamine dehydrogenase carries out the oxidation of methylamine. Electrons are passed from methylamine dehydrogenase to amicyanin; Belongs to the aromatic amine dehydrogenase light chain family. (177 aa)
Caul_0561PFAM: cytochrome c class I; KEGG: nar:Saro_1689 cytochrome c, class I. (157 aa)
Caul_0562KEGG: nar:Saro_1690 cytochrome c, class I. (156 aa)
Caul_0563PFAM: TonB-dependent receptor; TonB-dependent receptor plug; KEGG: nar:Saro_1691 TonB-dependent receptor. (737 aa)
Caul_2363PFAM: Sarcosine oxidase gamma subunit; KEGG: xau:Xaut_4703 sarcosine oxidase gamma subunit. (153 aa)
Caul_2364TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rpb:RPB_1143 sarcosine oxidase, alpha subunit family; Belongs to the GcvT family. (984 aa)
Caul_2365PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: mlo:msl7305 sarcosine oxidase delta subunit. (97 aa)
Caul_2366TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: bbt:BBta_1949 sarcosine oxidase, beta subunit. (417 aa)
Caul_2367Transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; ThiJ/PfpI domain protein; KEGG: azc:AZC_1497 regulatory protein. (311 aa)
Caul_3934PFAM: FAD dependent oxidoreductase; KEGG: ccr:CC_3121 phytoene dehydrogenase-related protein. (549 aa)
Caul_3935PFAM: Rieske [2Fe-2S] domain protein; KEGG: ccr:CC_3122 Rieske 2Fe-2S family protein. (385 aa)
Caul_3936PFAM: regulatory protein TetR; KEGG: ccr:CC_3123 transcriptional regulator, TetR family. (197 aa)
Caul_3937PFAM: GCN5-related N-acetyltransferase; KEGG: swi:Swit_3215 GCN5-related N-acetyltransferase. (177 aa)
Your Current Organism:
Caulobacter sp. K31
NCBI taxonomy Id: 366602
Other names: C. sp. K31
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